Genetic analysis reveals the complex structure of HIV-1 transmission within defined risk groups (Q33934355)

30 July 2017

Genetic analysis reveals the complex structure of HIV-1 transmission within defined risk groups (English)

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30 July 2017

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30 July 2017

4

Oliver G Pybus

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Deenan Pillay

series ordinal

2

object named as

Deenan Pillay

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30 July 2017

Jonathan P Clewley

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PubMed ID

15767575

30 July 2017

language of work or name

English

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publication date

14 March 2005

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Proceedings of the National Academy of Sciences of the United States of America

30 July 2017

5

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based on heuristic

inferred from page(s)

published in

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30 July 2017

102

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30 July 2017

4425-4429

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30 July 2017

12

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Recent trends in HIV and other STIs in the United Kingdom: data to the end of 2002

30 July 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=555492

Unifying the epidemiological and evolutionary dynamics of pathogens

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=555492

Tracing the origin and history of the HIV-2 epidemic

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=555492

U.S. Human immunodeficiency virus type 1 epidemic: date of origin, population history, and characterization of early strains

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=555492

Estimating mutation parameters, population history and genealogy simultaneously from temporally spaced sequence data

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=555492

The epidemic behavior of the hepatitis C virus

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=555492

Origins of the coalescent. 1974-1982

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=555492

Estimating the rate of molecular evolution: incorporating non-contemporaneous sequences into maximum likelihood phylogenies

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=555492

Evolution of lamivudine resistance in human immunodeficiency virus type 1-infected individuals: the relative roles of drift and selection

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=555492

Timing the ancestor of the HIV-1 pandemic strains

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=555492

Search for the mechanism of genetic variation in the pro gene of human immunodeficiency virus.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=555492

MODELTEST: testing the model of DNA substitution

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=555492

Accurate reconstruction of a known HIV-1 transmission history by phylogenetic tree analysis

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=555492

Role of the primary infection in epidemics of HIV infection in gay cohorts.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=555492

Sampling theory for neutral alleles in a varying environment.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=555492

Nevirapine resistance mutations of human immunodeficiency virus type 1 selected during therapy

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=555492

Estimating effective population size and mutation rate from sequence data using Metropolis-Hastings sampling.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=555492

Maximum-likelihood estimation of evolutionary trees from continuous characters

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=555492

Dating of the human-ape splitting by a molecular clock of mitochondrial DNA

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=555492

The neighbor-joining method: a new method for reconstructing phylogenetic trees

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=555492

HIV incidence appears constant in men who have sex with men despite widespread use of effective antiretroviral therapy.

5 July 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0407534102

Revealing the history of infectious disease epidemics through phylogenetic trees

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0407534102

Inferring population history from molecular phylogenies.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0407534102

HIV-1 pol gene variation is sufficient for reconstruction of transmissions in the era of antiretroviral therapy.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0407534102

Distinct patterns of natural selection in the reverse transcriptase gene of HIV-1 in the presence and absence of antiretroviral therapy

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0407534102

Confidence Limits on Phylogenies: an Approach using the Bootstrap

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0407534102

Recent evolutionary history of human immunodeficiency virus type 1 subtype B: reconstruction of epidemic onset based on sequence distances to the common ancestor

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0407534102

GENIE: estimating demographic history from molecular phylogenies.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0407534102

The role of early HIV infection in the spread of HIV through populations

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0407534102

Acute HIV infection: impact on the spread of HIV and transmission of drug resistance.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0407534102

Sexual behaviour in Britain: partnerships, practices, and HIV risk behaviours

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0407534102

Estimating the pattern of nucleotide substitution

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/15767575

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1073/PNAS.0407534102

1 reference

30 July 2017

0 references

1 reference

30 July 2017

1 reference

PubMed ID

15767575