Common risk alleles for inflammatory diseases are targets of recent positive selection (Q36742533)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23522783%20AND%20SRC:MED&resulttype=core&format=json

27 February 2020

title

Common risk alleles for inflammatory diseases are targets of recent positive selection (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23522783%20AND%20SRC:MED&resulttype=core&format=json

27 February 2020

0 references

5

1 reference

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27 February 2020

Joseph M Replogle

3

1 reference

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27 February 2020

Soumya Raychaudhuri

4

1 reference

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27 February 2020

6

Philip L De Jager

1 reference

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27 February 2020

author name string

Towfique Raj

1

1 reference

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27 February 2020

Manik Kuchroo

2

1 reference

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27 February 2020

language of work or name

English

0 references

publication date

21 March 2013

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23522783%20AND%20SRC:MED&resulttype=core&format=json

American Journal of Human Genetics

27 February 2020

published in

1 reference

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27 February 2020

volume

92

1 reference

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27 February 2020

issue

4

1 reference

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27 February 2020

page(s)

517-529

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23522783%20AND%20SRC:MED&resulttype=core&format=json

Th17 cells: biology, pathogenesis of autoimmune and inflammatory diseases, and therapeutic strategies

27 February 2020

cites work

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29 September 2017

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Alzheimer disease susceptibility loci: evidence for a protein network under natural selection

29 September 2017

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An encapsulated Yersinia pseudotuberculosis is a highly efficient vaccine against pneumonic plague

29 September 2017

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Deciphering the genetic architecture of variation in the immune response to Mycobacterium tuberculosis infection

29 September 2017

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Genome-wide meta-analysis identifies novel multiple sclerosis susceptibility loci

29 September 2017

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Signatures of environmental genetic adaptation pinpoint pathogens as the main selective pressure through human evolution

29 September 2017

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The many faces of Th17 cells

29 September 2017

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Pervasive sharing of genetic effects in autoimmune disease

29 September 2017

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Meta-analysis of genome-wide association studies in celiac disease and rheumatoid arthritis identifies fourteen non-HLA shared loci

29 September 2017

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Promise and pitfalls of the Immunochip

29 September 2017

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Genome-wide association study SNPs in the human genome diversity project populations: does selection affect unlinked SNPs with shared trait associations?

29 September 2017

1 reference

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Proteins encoded in genomic regions associated with immune-mediated disease physically interact and suggest underlying biology

29 September 2017

1 reference

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IL-17 in protective immunity to intracellular pathogens

29 September 2017

1 reference

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Progress and promise of genome-wide association studies for human complex trait genetics

29 September 2017

1 reference

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Genome-wide meta-analysis increases to 71 the number of confirmed Crohn's disease susceptibility loci

29 September 2017

1 reference

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Mapping of numerous disease-associated expression polymorphisms in primary peripheral blood CD4+ lymphocytes

29 September 2017

1 reference

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Extreme evolutionary disparities seen in positive selection across seven complex diseases

29 September 2017

1 reference

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LocusZoom: regional visualization of genome-wide association scan results

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3617371

Evolutionary and functional analysis of celiac risk loci reveals SH2B3 as a protective factor against bacterial infection

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3617371

Genetics and beyond--the transcriptome of human monocytes and disease susceptibility

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3617371

Candidate causal regulatory effects by integration of expression QTLs with complex trait genetic associations

29 September 2017

1 reference

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The genetics of human adaptation: hard sweeps, soft sweeps, and polygenic adaptation

29 September 2017

1 reference

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Genome-wide identification of susceptibility alleles for viral infections through a population genetics approach

29 September 2017

1 reference

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From evolutionary genetics to human immunology: how selection shapes host defence genes

29 September 2017

1 reference

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A large-scale replication study identifies TNIP1, PRDM1, JAZF1, UHRF1BP1 and IL10 as risk loci for systemic lupus erythematosus

29 September 2017

1 reference

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Unbiased reconstruction of a mammalian transcriptional network mediating pathogen responses

29 September 2017

1 reference

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Meta-analysis of genome scans and replication identify CD6, IRF8 and TNFRSF1A as new multiple sclerosis susceptibility loci

29 September 2017

1 reference

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The G428A nonsense mutation in FUT2 provides strong but not absolute protection against symptomatic GII.4 Norovirus infection

29 September 2017

1 reference

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Constructing genomic maps of positive selection in humans: where do we go from here?

29 September 2017

1 reference

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Signals of recent positive selection in a worldwide sample of human populations

29 September 2017

1 reference

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29 September 2017

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A large-scale analysis of tissue-specific pathology and gene expression of human disease genes and complexes

29 September 2017

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Detecting shared pathogenesis from the shared genetics of immune-related diseases

29 September 2017

1 reference

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IL-23 and autoimmunity: new insights into the pathogenesis of inflammatory bowel disease

29 September 2017

1 reference

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InnateDB: facilitating systems-level analyses of the mammalian innate immune response.

29 September 2017

1 reference

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Worldwide population differentiation at disease-associated SNPs

29 September 2017

1 reference

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IL-22 mediates mucosal host defense against Gram-negative bacterial pneumonia

29 September 2017

1 reference

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Interleukin-22 mediates early host defense against attaching and effacing bacterial pathogens

29 September 2017

1 reference

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Natural selection has driven population differentiation in modern humans

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3617371

Recent and ongoing selection in the human genome

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3617371

Genome-wide detection and characterization of positive selection in human populations

29 September 2017

1 reference

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A genome-wide association study of global gene expression

29 September 2017

1 reference

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Population genomics of human gene expression

29 September 2017

1 reference

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Differentiation and function of Th17 T cells

29 September 2017

1 reference

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A human phenome-interactome network of protein complexes implicated in genetic disorders

29 September 2017

1 reference

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Positive natural selection in the human lineage

29 September 2017

1 reference

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A map of recent positive selection in the human genome

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3617371

Genomic scans for selective sweeps using SNP data

29 September 2017

1 reference

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Divergent roles of IL-23 and IL-12 in host defense against Klebsiella pneumoniae

29 September 2017

1 reference

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Interrogating a high-density SNP map for signatures of natural selection

29 September 2017

1 reference

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Family size, infection and atopy: the first decade of the "hygiene hypothesis".

29 September 2017

1 reference

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Pattern of nucleotide substitution at major histocompatibility complex class I loci reveals overdominant selection

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3617371

Hay fever, hygiene, and household size

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3617371

Th17 cells in inflammatory conditions

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3617371

Searching for signals of evolutionary selection in 168 genes related to immune function.

5 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3617371

Signatures of historical demography and pathogen richness on MHC class I genes

5 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3617371

Pathogen-Driven Selection and Worldwide HLA Class I Diversity

4 December 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3617371

Plotting haplotype-specific linkage disequilibrium patterns by extended haplotype homozygosity

4 December 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/23522783

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

ESTIMATING F-STATISTICS FOR THE ANALYSIS OF POPULATION STRUCTURE.

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/23522783

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1016/J.AJHG.2013.03.001

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23522783%20AND%20SRC:MED&resulttype=core&format=json

27 February 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23522783%20AND%20SRC:MED&resulttype=core&format=json

27 February 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23522783%20AND%20SRC:MED&resulttype=core&format=json