Unbiased reconstruction of a mammalian transcriptional network mediating pathogen responses (Q24602140)

8

Jennifer K

Grenier

1 reference

19 October 2023

Weibo Li

9

Weibo

Li

1 reference

19 October 2023

Lisa A Schubert

11

Lisa A

Schubert

1 reference

19 October 2023

Brian Birditt

12

Brian

Birditt

1 reference

19 October 2023

Xiaolan Zhang

15

Xiaolan

Zhang

1 reference

19 October 2023

Zachary Smith

16

Zachary

Smith

1 reference

19 October 2023

Raquel Deering

17

Raquel

Deering

1 reference

19 October 2023

Rebecca C McDonald

18

Rebecca C

McDonald

1 reference

19 October 2023

Alex Meissner

22

Alex

Learning a prior on regulatory potential from eQTL data

Meissner

1 reference

19 October 2023

language of work or name

English

0 references

publication date

9 October 2009

0 references

published in

Science

0 references

volume

326

0 references

page(s)

257-63

0 references

issue

5950

0 references

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2879337

Induced ncRNAs allosterically modify RNA-binding proteins in cis to inhibit transcription

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2879337

Structure and function of the feed-forward loop network motif

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2879337

Interferon-alpha induction through Toll-like receptors involves a direct interaction of IRF7 with MyD88 and TRAF6

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2879337

TRAM couples endocytosis of Toll-like receptor 4 to the induction of interferon-beta

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2879337

Mouse polycomb proteins bind differentially to methylated histone H3 and RNA and are enriched in facultative heterochromatin

7 April 2017

1 reference

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Direct multiplexed measurement of gene expression with color-coded probe pairs

7 April 2017

1 reference

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Network motifs: theory and experimental approaches

7 April 2017

1 reference

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Module networks: identifying regulatory modules and their condition-specific regulators from gene expression data

7 April 2017

1 reference

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The transcriptional network that controls growth arrest and differentiation in a human myeloid leukemia cell line.

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2879337

The roles of TLRs, RLRs and NLRs in pathogen recognition

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2879337

The evolution of hierarchical gene regulatory networks

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2879337

Uncovering a macrophage transcriptional program by integrating evidence from motif scanning and expression dynamics

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2879337

Genetic reconstruction of a functional transcriptional regulatory network

27 September 2017

1 reference

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A systems approach to mapping DNA damage response pathways

27 September 2017

1 reference

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The yin and yang of type I interferon activity in bacterial infection

27 September 2017

1 reference

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Metagenes and molecular pattern discovery using matrix factorization

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2879337

IRF3 mediates a TLR3/TLR4-specific antiviral gene program

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2879337

The role of chemokines in linking innate and adaptive immunity

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2879337

Function of C/EBPdelta in a regulatory circuit that discriminates between transient and persistent TLR4-induced signals

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2879337

Structure and function of a transcriptional network activated by the MAPK Hog1.

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2879337

Polycomb protein Cbx4 promotes SUMO modification of de novo DNA methyltransferase Dnmt3a

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2879337

Transcriptional regulatory circuits: predicting numbers from alphabets

30 May 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1179050

A module of negative feedback regulators defines growth factor signaling

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1179050

Minreg: inferring an active regulator set.

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1179050

Distinct physiological states of Plasmodium falciparum in malaria-infected patients

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1179050

The plasticity of dendritic cell responses to pathogens and their components

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/19729616

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Splitting vessels: keeping lymph apart from blood

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1179050

inferred from DOI database lookup

7 January 2021

based on heuristic

Regularization and variable selection via the elastic net

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.1179050

inferred from DOI database lookup

7 January 2021

based on heuristic

Identifiers

DOI

10.1126/SCIENCE.1179050

1 reference

1001541

ADS bibcode

2009Sci...326..257A

0 references

1001541

1 reference

1 reference

1 reference