Complete genome sequence of the motile actinomycete Actinoplanes missouriensis 431(T) (= NBRC 102363(T)) (Q36601433)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23407331%20AND%20SRC:MED&resulttype=core&format=json

23 February 2020

title

Complete genome sequence of the motile actinomycete Actinoplanes missouriensis 431(T) (= NBRC 102363(T)) (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23407331%20AND%20SRC:MED&resulttype=core&format=json

23 February 2020

main subject

genomics

0 references

whole genome sequencing

1 reference

2

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23 February 2020

author name string

Hideki Yamamura

1

1 reference

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23 February 2020

Jun Ishikawa

3

1 reference

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23 February 2020

Natsuko Ichikawa

4

1 reference

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23 February 2020

Haruo Ikeda

5

1 reference

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23 February 2020

Mitsuo Sekine

6

1 reference

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23 February 2020

Takeshi Harada

7

1 reference

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23 February 2020

Sueharu Horinouchi

8

1 reference

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23 February 2020

Misa Otoguro

9

1 reference

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23 February 2020

Tomohiko Tamura

10

1 reference

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23 February 2020

Ken-Ichiro Suzuki

11

1 reference

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23 February 2020

Yasutaka Hoshino

12

1 reference

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23 February 2020

Akira Arisawa

13

1 reference

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23 February 2020

Youji Nakagawa

14

1 reference

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23 February 2020

Nobuyuki Fujita

15

1 reference

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23 February 2020

Masayuki Hayakawa

16

1 reference

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23 February 2020

language of work or name

1 reference

18 December 2012

1 reference

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Standards in genomic sciences

23 February 2020

published in

1 reference

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23 February 2020

volume

7

1 reference

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23 February 2020

issue

2

1 reference

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23 February 2020

page(s)

294-303

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https://scigraph.springernature.com/pub.10.4056/sigs.3196539

23 February 2020

exact match

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cites work

The complete genome sequence of the acarbose producer Actinoplanes sp. SE50/110.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3569393

MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3569393

Characterization of Actinoplanes missouriensis spore flagella

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3569393

Genome sequence of Kitasatospora setae NBRC 14216T: an evolutionary snapshot of the family Streptomycetaceae.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3569393

The Genomes On Line Database (GOLD) in 2009: status of genomic and metagenomic projects and their associated metadata

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3569393

An update of the structure and 16S rRNA gene sequence-based definition of higher ranks of the class Actinobacteria, with the proposal of two new suborders and four new families and emended descriptions of the existing higher taxa

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3569393

The minimum information about a genome sequence (MIGS) specification

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3569393

Identifying bacterial genes and endosymbiont DNA with Glimmer

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3569393

Studies in the Nomenclature and Classification of the Bacteria: VIII. The Subgroups and Genera of the Actinomycetales

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3569393

Studies in the Nomenclature and Classification of the Bacteria: II. The Primary Subdivisions of the Schizomycetes

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3569393

Multiple sequence alignment using partial order graphs

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3569393

Gene ontology: tool for the unification of biology

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3569393

Selection of conserved blocks from multiple alignments for their use in phylogenetic analysis

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3569393

Base-calling of automated sequencer traces using phred. II. Error probabilities

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3569393

Base-calling of automated sequencer traces using phred. I. Accuracy assessment

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3569393

tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence

30 September 2017

2 references

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3569393

30 September 2017

https://api.crossref.org/works/10.4056%2FSIGS.3196539

16S ribosomal DNA analysis of the genera Micromonospora, Actinoplanes, Catellatospora, Catenuloplanes, Couchioplanes, Dactylosporangium, and Pilimelia and emendation of the family Micromonosporaceae.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3569393

Cell wall composition of Micromonospora olivoasterospora, Micromonospora sagamiensis, and related organisms

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3569393

Xylose isomerase from Actinoplanes missouriensis: primary structure of the gene and the protein

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3569393

Towards a natural system of organisms: proposal for the domains Archaea, Bacteria, and Eucarya

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3569393

Formation, Properties, and Germination of Actinomycete Spores

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3569393

Approved Lists of Bacterial Names

30 September 2017

1 reference

https://api.crossref.org/works/10.4056%2FSIGS.3196539

Variation and predicted structure of the flagellin gene in Actinoplanes species

21 January 2018

1 reference

https://api.crossref.org/works/10.4056%2FSIGS.3196539

Isolation of mak1 from Actinoplanes missouriensis and evidence that Pep2 from Streptomyces coelicolor is a maltokinase.

21 January 2018

1 reference

https://api.crossref.org/works/10.4056%2FSIGS.3196539

Proposal for a New Hierarchic Classification System, Actinobacteria classis nov.

21 January 2018

1 reference

https://api.crossref.org/works/10.4056%2FSIGS.3196539

Bacterial degradation of natural rubber: a privilege of actinomycetes?

21 January 2018

1 reference

https://api.crossref.org/works/10.4056%2FSIGS.3196539

Identification of linear plasmid pAM1 in the flavonoid degrading strain Actinoplanes missouriensis(T) (DSM 43046).

21 January 2018

1 reference

https://api.crossref.org/works/10.4056%2FSIGS.3196539

Actinoplanes caeruleus sp. nov., a Blue-Pigmented Species of the Genus Actinoplanes

21 January 2018

1 reference

https://api.crossref.org/works/10.4056%2FSIGS.3196539

FramePlot: a new implementation of the frame analysis for predicting protein-coding regions in bacterial DNA with a high G + C content.

21 January 2018

1 reference

https://api.crossref.org/works/10.4056%2FSIGS.3196539

Union of the genera Actinoplanes couch, Ampullariella couch, and Amorphosporangium couch in a redefined genus Actinoplanes

21 January 2018

1 reference

https://api.crossref.org/works/10.4056%2FSIGS.3196539

Actaplanin, new glycopeptide antibiotics produced by Actinoplanes missouriensis. The isolation and preliminary chemical characterization of actaplanin

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/23407331

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Characterization of the biosynthesis gene cluster for alkyl-O-dihydrogeranyl-methoxyhydroquinones in Actinoplanes missouriensis

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/23407331

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.4056/SIGS.3196539

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23407331%20AND%20SRC:MED&resulttype=core&format=json

Dimensions Publication ID

23 February 2020

0 references

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23407331%20AND%20SRC:MED&resulttype=core&format=json

23 February 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23407331%20AND%20SRC:MED&resulttype=core&format=json