Bioinformatics can boost metabolomics research (Q36384183)

13 August 2017

1 reference

title

Bioinformatics can boost metabolomics research (English)

1 reference

13 August 2017

1 reference

1 reference

4

Steffen Neumann

1 reference

13 August 2017

2

Christoph Ruttkies

1 reference

13 August 2017

René Meier

1

1 reference

PubMed ID

28554829

13 August 2017

Hendrik Treutler

series ordinal

3

1 reference

13 August 2017

26 May 2017

1 reference

13 August 2017

Journal of Biotechnology

1 reference

MetFrag relaunched: incorporating strategies beyond in silico fragmentation

13 August 2017

1 reference

https://opencitations.net/index/coci/api/v1/citations/10.1186/S13321-016-0115-9

COCI

reference URL

Metabolomics Workbench: An international repository for metabolomics data and metadata, metabolite standards, protocols, tutorials and training, and analysis tools

5 October 2021

1 reference

1 April 2022

https://opencitations.net/index/coci/api/v1/citations/10.1093/NAR/GKV1042

In silico fragmentation for computer assisted identification of metabolite mass spectra

1 reference

4 April 2022

https://opencitations.net/index/coci/api/v1/citations/10.1186/1471-2105-11-148

OpenMS - an open-source software framework for mass spectrometry

1 reference

20 May 2022

https://opencitations.net/index/coci/api/v1/citations/10.1186/1471-2105-9-163

The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2016 update

1 reference

24 May 2022

https://opencitations.net/index/coci/api/v1/citations/10.1093/NAR/GKW343

OpenMS: a flexible open-source software platform for mass spectrometry data analysis

1 reference

27 May 2022

https://opencitations.net/index/coci/api/v1/citations/10.1038/NMETH.3959

MassBank: a public repository for sharing mass spectral data for life sciences

2 references

28 May 2022

https://opencitations.net/index/coci/api/v1/citations/10.1002/JMS.1777

27 May 2022

https://opencitations.net/index/coci/api/v1/citations/10.1002/JMS.1777

ChemSpider: An Online Chemical Information Resource

1 reference

https://opencitations.net/index/coci/api/v1/citations/10.1021/ED100697W

COCI

reference URL

MetaboAnalyst 3.0--making metabolomics more meaningful

10 July 2022

1 reference

25 December 2022

https://opencitations.net/index/coci/api/v1/citations/10.1093/NAR/GKV380

Discovering Regulated Metabolite Families in Untargeted Metabolomics Studies.

2 references

5 May 2024

https://opencitations.net/index/api/v1/citations/10.1021/ACS.ANALCHEM.6B01569

5 May 2024

https://opencitations.net/index/api/v1/references/10.1016/J.JBIOTEC.2017.05.018

Metabolite profiling and quantification of phenolic compounds in methanol extracts of tomato fruit

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1016/J.JBIOTEC.2017.05.018

Mass spectral molecular networking of living microbial colonies

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1016/J.JBIOTEC.2017.05.018

AraCyc: a biochemical pathway database for Arabidopsis

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1016/J.JBIOTEC.2017.05.018

Galaxy-M: a Galaxy workflow for processing and analyzing direct infusion and liquid chromatography mass spectrometry-based metabolomics data

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1016/J.JBIOTEC.2017.05.018

Effect-directed analysis of Ah receptor-mediated activities caused by PAHs in suspended particulate matter sampled in flood events

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1016/J.JBIOTEC.2017.05.018

Workflow4Metabolomics: a collaborative research infrastructure for computational metabolomics

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1016/J.JBIOTEC.2017.05.018

XCMS: processing mass spectrometry data for metabolite profiling using nonlinear peak alignment, matching, and identification

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1016/J.JBIOTEC.2017.05.018

Ten simple rules for reproducible computational research

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1016/J.JBIOTEC.2017.05.018

Analysis of the Human Adult Urinary Metabolome Variations with Age, Body Mass Index, and Gender by Implementing a Comprehensive Workflow for Univariate and OPLS Statistical Analyses

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1016/J.JBIOTEC.2017.05.018

Metabolic Fingerprinting to Assess the Impact of Salinity on Carotenoid Content in Developing Tomato Fruits

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1016/J.JBIOTEC.2017.05.018

Using Galaxy-P to leverage RNA-Seq for the discovery of novel protein variations

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1016/J.JBIOTEC.2017.05.018

HMDB: the Human Metabolome Database

2 references

5 May 2024

https://opencitations.net/index/api/v1/references/10.1016/J.JBIOTEC.2017.05.018

5 May 2024

https://opencitations.net/index/api/v1/citations/10.1093/NAR/GKL923

MetaboLights--an open-access general-purpose repository for metabolomics studies and associated meta-data

2 references

5 May 2024

https://opencitations.net/index/api/v1/references/10.1016/J.JBIOTEC.2017.05.018

5 May 2024

https://opencitations.net/index/api/v1/citations/10.1093/NAR/GKS1004

Comparing Wild American Grapes with Vitis vinifera: A Metabolomics Study of Grape Composition

2 references

5 May 2024

https://opencitations.net/index/api/v1/references/10.1016/J.JBIOTEC.2017.05.018

5 May 2024

https://opencitations.net/index/api/v1/citations/10.1021/ACS.JAFC.5B01999

Quantitative Analysis of Urine Vapor and Breath by Gas-Liquid Partition Chromatography

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1016/J.JBIOTEC.2017.05.018

Metabolite profiling and quantification of phytochemicals in potato extracts using ultra-high-performance liquid chromatography-mass spectrometry.

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1016/J.JBIOTEC.2017.05.018

MetExplore: a web server to link metabolomic experiments and genome-scale metabolic networks

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1016/J.JBIOTEC.2017.05.018

HMDB 3.0--The Human Metabolome Database in 2013

2 references

5 May 2024

https://opencitations.net/index/api/v1/references/10.1016/J.JBIOTEC.2017.05.018

5 May 2024

https://opencitations.net/index/api/v1/citations/10.1093/NAR/GKS1065

Future water quality monitoring--adapting tools to deal with mixtures of pollutants in water resource management

2 references

5 May 2024

https://opencitations.net/index/api/v1/references/10.1016/J.JBIOTEC.2017.05.018

5 May 2024

https://opencitations.net/index/api/v1/citations/10.1016/J.SCITOTENV.2014.12.057

PubChem: a public information system for analyzing bioactivities of small molecules

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1016/J.JBIOTEC.2017.05.018

MetAlign 3.0: performance enhancement by efficient use of advances in computer hardware

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1016/J.JBIOTEC.2017.05.018

Topic modeling for untargeted substructure exploration in metabolomics

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1016/J.JBIOTEC.2017.05.018

Mass spectral databases for LC/MS- and GC/MS-based metabolomics: State of the field and future prospects

2 references

5 May 2024

https://opencitations.net/index/api/v1/references/10.1016/J.JBIOTEC.2017.05.018

5 May 2024

https://opencitations.net/index/api/v1/citations/10.1016/J.TRAC.2015.09.005

Metabolic derangements identified through untargeted metabolomics in a cross-sectional study of Nigerian children with severe acute malnutrition

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1016/J.JBIOTEC.2017.05.018

METLIN: a metabolite mass spectral database

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1016/J.JBIOTEC.2017.05.018

'Metabonomics': understanding the metabolic responses of living systems to pathophysiological stimuli via multivariate statistical analysis of biological NMR spectroscopic data

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1016/J.JBIOTEC.2017.05.018

Systematic functional analysis of the yeast genome

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1016/J.JBIOTEC.2017.05.018

A novel approach for nontargeted data analysis for metabolomics. Large-scale profiling of tomato fruit volatiles.

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1016/J.JBIOTEC.2017.05.018

Identifiers

DOI

10.1016/J.JBIOTEC.2017.05.018

1 reference

13 August 2017

1 reference

PubMed ID

28554829