Nature and function of insulator protein binding sites in the Drosophila genome. (Q36354877)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22767387%20AND%20SRC:MED&resulttype=core&format=json

7 February 2020

title

Nature and function of insulator protein binding sites in the Drosophila genome (English)

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7 February 2020

0 references

6

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7 February 2020

Andrey Gorchakov

7

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7 February 2020

Aki Minoda

8

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3

Peter V Kharchenko

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19

Gary H Karpen

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7 February 2020

author name string

Yuri B Schwartz

1

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7 February 2020

Daniela Linder-Basso

2

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7 February 2020

Michael Y Tolstorukov

4

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7 February 2020

Maria Kim

5

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7 February 2020

Gregory Shanower

9

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7 February 2020

Artyom A Alekseyenko

10

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7 February 2020

Nicole C Riddle

11

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7 February 2020

Youngsook L Jung

12

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7 February 2020

Tingting Gu

13

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7 February 2020

Annette Plachetka

14

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7 February 2020

Sarah C R Elgin

15

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7 February 2020

Mitzi I Kuroda

16

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7 February 2020

Peter J Park

17

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7 February 2020

Mikhail Savitsky

18

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7 February 2020

Vincenzo Pirrotta

20

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7 February 2020

publication date

5 July 2012

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7 February 2020

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7 February 2020

volume

22

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7 February 2020

page(s)

2188-2198

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7 February 2020

issue

11

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Regulation of chromatin organization and inducible gene expression by a Drosophila insulator

7 February 2020

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3483548

The role of the Suppressor of Hairy-wing insulator protein in Drosophila oogenesis.

30 September 2017

1 reference

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Histone methylation by PRC2 is inhibited by active chromatin marks

30 September 2017

1 reference

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A cis-regulatory map of the Drosophila genome.

30 September 2017

1 reference

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A chromatin insulator driving three-dimensional Polycomb response element (PRE) contacts and Polycomb association with the chromatin fiber

30 September 2017

1 reference

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Comprehensive analysis of the chromatin landscape in Drosophila melanogaster

30 September 2017

1 reference

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The transcriptional diversity of 25 Drosophila cell lines

30 September 2017

1 reference

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Insulators, not Polycomb response elements, are required for long-range interactions between Polycomb targets in Drosophila melanogaster

30 September 2017

1 reference

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The transcriptional interactome: gene expression in 3D.

30 September 2017

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A comprehensive map of insulator elements for the Drosophila genome

30 September 2017

1 reference

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Alternative epigenetic chromatin states of polycomb target genes

30 September 2017

1 reference

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Three subclasses of a Drosophila insulator show distinct and cell type-specific genomic distributions

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3483548

Active promoters and insulators are marked by the centrosomal protein 190.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3483548

Global analysis of the insulator binding protein CTCF in chromatin barrier regions reveals demarcation of active and repressive domains

30 September 2017

1 reference

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Investigation of the properties of non-gypsy suppressor of hairy-wing-binding sites

30 September 2017

1 reference

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Coordinated control of dCTCF and gypsy chromatin insulators in Drosophila

30 September 2017

1 reference

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Genomic mapping of Suppressor of Hairy-wing binding sites in Drosophila

30 September 2017

1 reference

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CTCF genomic binding sites in Drosophila and the organisation of the bithorax complex

30 September 2017

1 reference

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Analysis of the vertebrate insulator protein CTCF-binding sites in the human genome

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3483548

An optimized transgenesis system for Drosophila using germ-line-specific phiC31 integrases

30 September 2017

1 reference

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Dynamic genome architecture in the nuclear space: regulation of gene expression in three dimensions

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3483548

CTCF mediates long-range chromatin looping and local histone modification in the beta-globin locus

30 September 2017

1 reference

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CTCF binding at the H19 imprinting control region mediates maternally inherited higher-order chromatin conformation to restrict enhancer access to Igf2

30 September 2017

1 reference

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Genome-wide analysis of Polycomb targets in Drosophila melanogaster

30 September 2017

1 reference

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CTCF is conserved from Drosophila to humans and confers enhancer blocking of the Fab-8 insulator

30 September 2017

1 reference

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An endogenous suppressor of hairy-wing insulator separates regulatory domains in Drosophila.

30 September 2017

1 reference

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The Zw5 protein, a component of the scs chromatin domain boundary, is able to block enhancer-promoter interaction

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3483548

Chromatin insulator elements block the silencing of a target gene by the Drosophila polycomb response element (PRE) but allow trans interactions between PREs on different chromosomes

30 September 2017

1 reference

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Visualization of chromosomal domains with boundary element-associated factor BEAF-32.

30 September 2017

1 reference

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The 87A7 chromomere. Identification of novel chromatin structures flanking the heat shock locus that may define the boundaries of higher order domains

30 September 2017

1 reference

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A novel sequence-specific DNA binding protein which interacts with three regularly spaced direct repeats of the CCCTC-motif in the 5'-flanking sequence of the chicken c-myc gene

30 September 2017

1 reference

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Modular structure of a chicken lysozyme silencer: involvement of an unusual thyroid hormone receptor binding site

30 September 2017

1 reference

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DNA position-specific repression of transcription by a Drosophila zinc finger protein

30 September 2017

1 reference

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The Drosophila su(Hw) gene, which controls the phenotypic effect of the gypsy transposable element, encodes a putative DNA-binding protein

30 September 2017

1 reference

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The Drosophila insulator proteins CTCF and CP190 link enhancer blocking to body patterning

30 September 2017

1 reference

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A Drosophila protein that imparts directionality on a chromatin insulator is an enhancer of position-effect variegation.

29 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3483548

Novel genes influencing the expression of the yellow locus and mdg4 (gypsy) in Drosophila melanogaster.

29 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3483548

DNA bending is a determinant of binding specificity for a Drosophila zinc finger protein.

29 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3483548

Repression of hsp70 heat shock gene transcription by the suppressor of hairy-wing protein of Drosophila melanogaster

29 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3483548

Polycomb complexes and the propagation of the methylation mark at the Drosophila ubx gene.

29 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3483548

CTCF mediates interchromosomal colocalization between Igf2/H19 and Wsb1/Nf1.

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3483548

The centrosomal protein CP190 is a component of the gypsy chromatin insulator.

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3483548

An endogenous Su(Hw) insulator separates the yellow gene from the Achaete-scute gene complex in Drosophila.

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3483548

Polycomb and trithorax group proteins mediate the function of a chromatin insulator.

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3483548

22 September 2018

Identifiers

DOI

10.1101/GR.138156.112

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22767387%20AND%20SRC:MED&resulttype=core&format=json

7 February 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22767387%20AND%20SRC:MED&resulttype=core&format=json

7 February 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22767387%20AND%20SRC:MED&resulttype=core&format=json