CRISPR library designer (CLD): software for multispecies design of single guide RNA libraries (Q35969850)

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31 March 2020

title

CRISPR library designer (CLD): software for multispecies design of single guide RNA libraries (English)

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31 March 2020

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1

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31 March 2020

Tianzuo Zhan

2

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31 March 2020

Michael Boutros

7

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31 March 2020

author name string

Marco Breinig

3

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31 March 2020

Jan Winter

4

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31 March 2020

Dirk Brügemann

5

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31 March 2020

Svenja Leible

6

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31 March 2020

publication date

24 March 2016

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31 March 2020

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31 March 2020

volume

17

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31 March 2020

page(s)

55

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https://scigraph.springernature.com/pub.10.1186/s13059-016-0915-2

31 March 2020

exact match

0 references

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Sequence determinants of improved CRISPR sgRNA design

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Discovery of cancer drug targets by CRISPR-Cas9 screening of protein domains

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2 October 2017

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2 October 2017

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GUIDE-seq enables genome-wide profiling of off-target cleavage by CRISPR-Cas nucleases

2 October 2017

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Genome-Scale CRISPR-Mediated Control of Gene Repression and Activation

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2 October 2017

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Efficient mutagenesis by Cas9 protein-mediated oligonucleotide insertion and large-scale assessment of single-guide RNAs

2 October 2017

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CHOPCHOP: a CRISPR/Cas9 and TALEN web tool for genome editing

2 October 2017

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2 October 2017

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2 October 2017

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2 October 2017

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2 October 2017

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2 October 2017

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2 October 2017

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2 October 2017

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2 October 2017

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2 October 2017

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2 October 2017

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2 October 2017

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2 October 2017

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2 October 2017

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2 October 2017

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Fast gapped-read alignment with Bowtie 2

2 October 2017

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2 October 2017

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Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4807595

A mitochondrial block and expression of XIAP lead to resistance to TRAIL-induced apoptosis during progression to metastasis of a colon carcinoma

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4807595

A lentiviral RNAi library for human and mouse genes applied to an arrayed viral high-content screen

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4807595

Identification of inhibitors of TRAIL-induced death (ITIDs) in the TRAIL-sensitive colon carcinoma cell line SW480 using a genetic approach.

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4807595

Death receptor 5, a new member of the TNFR family, and DR4 induce FADD-dependent apoptosis and activate the NF-kappaB pathway

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4807595

Basic local alignment search tool

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4807595

Flexible guide-RNA design for CRISPR applications using Protospacer Workbench.

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4807595

Unbiased detection of off-target cleavage by CRISPR-Cas9 and TALENs using integrase-defective lentiviral vectors.

24 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4807595

Targeted and genome-wide sequencing reveal single nucleotide variations impacting specificity of Cas9 in human stem cells

24 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4807595

E-CRISP: fast CRISPR target site identification.

24 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4807595

Mechanism of eukaryotic RNA polymerase III transcription termination

24 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4807595

Reconstitution of the death-inducing signaling complex reveals a substrate switch that determines CD95-mediated death or survival.

24 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4807595

10.1186/S13059-016-0915-2

24 September 2018

Identifiers

DOI

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31 March 2020

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27013184%20AND%20SRC:MED&resulttype=core&format=json

31 March 2020

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