Late-replicating heterochromatin is characterized by decreased cytosine methylation in the human genome. (Q35493825)

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13 February 2020

title

Late-replicating heterochromatin is characterized by decreased cytosine methylation in the human genome (English)

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13 February 2020

11

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13 February 2020

Mayumi Oda

2

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13 February 2020

Marien Pascual

4

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13 February 2020

Reid F Thompson

8

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13 February 2020

Melissa Fazzari

12

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13 February 2020

John Greally

16

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13 February 2020

author name string

Masako Suzuki

1

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13 February 2020

María-Paz Ramos

3

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13 February 2020

Kevin Lau

5

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13 February 2020

Edyta Stasiek

6

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13 February 2020

Frederick Agyiri

7

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13 February 2020

Jacob L Glass

9

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13 February 2020

Qiang Jing

10

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13 February 2020

R Scott Hansen

13

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13 February 2020

Andrew S McLellan

15

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13 February 2020

John A Stamatoyannopoulos

14

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13 February 2020

publication date

28 September 2011

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13 February 2020

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13 February 2020

volume

21

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13 February 2020

page(s)

1833-1840

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13 February 2020

issue

11

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21957152%20AND%20SRC:MED&resulttype=core&format=json

The multi-domain protein Np95 connects DNA methylation and histone modification.

13 February 2020

cites work

1 reference

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Sequencing newly replicated DNA reveals widespread plasticity in human replication timing

27 July 2018

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Gene body methylation of the dimethylarginine dimethylamino-hydrolase 2 (Ddah2) gene is an epigenetic biomarker for neural stem cell differentiation.

27 July 2018

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Targeted and genome-scale strategies reveal gene-body methylation signatures in human cells

27 July 2018

1 reference

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Heterochromatin and the cohesion of sister chromatids

27 July 2018

1 reference

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Massive parallel bisulfite sequencing of CG-rich DNA fragments reveals that methylation of many X-chromosomal CpG islands in female blood DNA is incomplete

27 July 2018

1 reference

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An analytical pipeline for genomic representations used for cytosine methylation studies

27 July 2018

1 reference

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Satellite DNAs between selfishness and functionality: structure, genomics and evolution of tandem repeats in centromeric (hetero)chromatin.

27 July 2018

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CG dinucleotide clustering is a species-specific property of the genome

27 July 2018

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Glimpses of evolution: heterochromatic histone H3K9 methyltransferases left its marks behind

27 July 2018

1 reference

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Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project

27 July 2018

1 reference

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H3K9 methylation and RNA interference regulate nucleolar organization and repeated DNA stability

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3205568

Human heterochromatin proteins form large domains containing KRAB-ZNF genes

27 July 2018

1 reference

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Genome-wide high-resolution mapping and functional analysis of DNA methylation in arabidopsis

27 July 2018

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GENCODE: producing a reference annotation for ENCODE

27 July 2018

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Comparative isoschizomer profiling of cytosine methylation: the HELP assay

27 July 2018

1 reference

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X chromosome choice occurs independently of asynchronous replication timing

27 July 2018

1 reference

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Forming facultative heterochromatin: silencing of an X chromosome in mammalian females

27 July 2018

1 reference

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Replication timing and transcriptional control: beyond cause and effect

27 July 2018

1 reference

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Heterogeneity of eukaryotic replicons, replicon clusters, and replication foci

27 July 2018

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Heterochromatin function in complex genomes

27 July 2018

1 reference

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The DNMT3B DNA methyltransferase gene is mutated in the ICF immunodeficiency syndrome

27 July 2018

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Identification and characterization of a family of mammalian methyl-CpG binding proteins

27 July 2018

1 reference

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Active mammalian replication origins are associated with a high-density cluster of mCpG dinucleotides

27 July 2018

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A densely methylated DNA island is associated with a chromosomal replication origin in the human RPS14 locus

27 July 2018

1 reference

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Inactive X chromosome has the highest concentration of unmethylated Hha I sites

27 July 2018

1 reference

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Evolution of chromosome bands: molecular ecology of noncoding DNA.

27 July 2018

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Replication timing-related and gene body-specific methylation of active human genes.

27 July 2018

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Optimized design and data analysis of tag-based cytosine methylation assays

26 September 2018

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Predictable dynamic program of timing of DNA replication in human cells

26 September 2018

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DNMT3B interacts with constitutive centromere protein CENP-C to modulate DNA methylation and the histone code at centromeric regions

26 September 2018

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High-resolution genome-wide cytosine methylation profiling with simultaneous copy number analysis and optimization for limited cell numbers.

26 September 2018

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26 September 2018

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HP1: a functionally multifaceted protein

26 September 2018

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Gene body-specific methylation on the active X chromosome

26 September 2018

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Genome-wide analysis of Arabidopsis thaliana DNA methylation uncovers an interdependence between methylation and transcription.

26 September 2018

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Analysis of chromosome breakpoints in neuroblastoma at sub-kilobase resolution using fine-tiling oligonucleotide array CGH.

26 September 2018

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Overall DNA methylation and chromatin structure of normal and abnormal X chromosomes.

26 September 2018

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Genome-wide DNA replication profile for Drosophila melanogaster: a link between transcription and replication timing

26 September 2018

1 reference

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Satellite 2 methylation patterns in normal and ICF syndrome cells and association of hypomethylation with advanced replication

26 September 2018

1 reference

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Initiation of DNA replication at CpG islands in mammalian chromosomes

26 September 2018

1 reference

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Digestion of human chromosomes by means of the isoschizomers MspI and HpaII

26 September 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21957152

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1101/GR.116509.110

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21957152%20AND%20SRC:MED&resulttype=core&format=json

13 February 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21957152%20AND%20SRC:MED&resulttype=core&format=json

13 February 2020

1 reference