5-Hydroxymethylcytosine is a predominantly stable DNA modification. (Q35244114)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25411882%20AND%20SRC:MED&resulttype=core&format=json

23 February 2020

title

5-Hydroxymethylcytosine is a predominantly stable DNA modification (English)

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23 February 2020

1

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23 February 2020

Adele Murrell

5

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23 February 2020

author name string

Santiago Uribe-Lewis

2

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23 February 2020

Xiaoping Yang

3

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23 February 2020

Michael Williams

4

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23 February 2020

Shankar Balasubramanian

6

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23 February 2020

publication date

21 September 2014

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23 February 2020

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23 February 2020

volume

6

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23 February 2020

page(s)

1049-1055

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23 February 2020

issue

12

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https://scigraph.springernature.com/pub.10.1038/nchem.2064

23 February 2020

exact match

0 references

cites work

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Cell cycle-dependent turnover of 5-hydroxymethyl cytosine in mouse embryonic stem cells

12 July 2018

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A screen for hydroxymethylcytosine and formylcytosine binding proteins suggests functions in transcription and chromatin regulation

12 July 2018

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TET enzymes, TDG and the dynamics of DNA demethylation.

12 July 2018

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Higher 5-hydroxymethylcytosine identifies immortal DNA strand chromosomes in asymmetrically self-renewing distributed stem cells

12 July 2018

1 reference

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Potential functional roles of DNA demethylation intermediates

12 July 2018

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Vitamin C induces Tet-dependent DNA demethylation and a blastocyst-like state in ES cells

12 July 2018

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Tet1 regulates adult hippocampal neurogenesis and cognition

12 July 2018

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Ascorbate induces ten-eleven translocation (Tet) methylcytosine dioxygenase-mediated generation of 5-hydroxymethylcytosine

12 July 2018

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5-Hydroxymethylcytosine: generation, fate, and genomic distribution

12 July 2018

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MeCP2 binds to 5hmC enriched within active genes and accessible chromatin in the nervous system.

12 July 2018

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Loss of 5-hydroxymethylcytosine is an epigenetic hallmark of melanoma

12 July 2018

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5-Methylcytosine and 5-hydroxymethylcytosine spatiotemporal profiles in the mouse zygote.

12 July 2018

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Base-resolution analysis of 5-hydroxymethylcytosine in the mammalian genome.

12 July 2018

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Quantitative sequencing of 5-methylcytosine and 5-hydroxymethylcytosine at single-base resolution

12 July 2018

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5-Hydroxymethylcytosine is strongly depleted in human cancers but its levels do not correlate with IDH1 mutations

12 July 2018

1 reference

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Replication-dependent loss of 5-hydroxymethylcytosine in mouse preimplantation embryos

12 July 2018

1 reference

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Global 5-hydroxymethylcytosine content is significantly reduced in tissue stem/progenitor cell compartments and in human cancers.

12 July 2018

1 reference

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Tet-mediated formation of 5-carboxylcytosine and its excision by TDG in mammalian DNA

12 July 2018

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Tet1 is dispensable for maintaining pluripotency and its loss is compatible with embryonic and postnatal development

12 July 2018

1 reference

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Tet proteins can convert 5-methylcytosine to 5-formylcytosine and 5-carboxylcytosine

12 July 2018

1 reference

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Hydroxylation of 5-methylcytosine by TET1 promotes active DNA demethylation in the adult brain

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4382525

TET1 and hydroxymethylcytosine in transcription and DNA methylation fidelity

12 July 2018

1 reference

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Genome-wide analysis of 5-hydroxymethylcytosine distribution reveals its dual function in transcriptional regulation in mouse embryonic stem cells.

12 July 2018

1 reference

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Reprogramming of the paternal genome upon fertilization involves genome-wide oxidation of 5-methylcytosine

12 July 2018

1 reference

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Tissue distribution of 5-hydroxymethylcytosine and search for active demethylation intermediates

12 July 2018

1 reference

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Role of Tet proteins in 5mC to 5hmC conversion, ES-cell self-renewal and inner cell mass specification

12 July 2018

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Sequencing newly replicated DNA reveals widespread plasticity in human replication timing

12 July 2018

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The nuclear DNA base 5-hydroxymethylcytosine is present in Purkinje neurons and the brain

12 July 2018

1 reference

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Conversion of 5-methylcytosine to 5-hydroxymethylcytosine in mammalian DNA by MLL partner TET1

12 July 2018

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The ground state of embryonic stem cell self-renewal

12 July 2018

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Genomic DNA methylation: the mark and its mediators

12 July 2018

1 reference

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Purification of nascent DNA chains by immunoprecipitation with anti-BrdU antibodies

12 July 2018

1 reference

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12 July 2018

1 reference

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Low values of 5-hydroxymethylcytosine (5hmC), the "sixth base," are associated with anaplasia in human brain tumors.

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4382525

Genome-wide regulation of 5hmC, 5mC, and gene expression by Tet1 hydroxylase in mouse embryonic stem cells

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4382525

The kinetics of DNA methylation in cultures of a mouse adrenal cell line

26 September 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/25411882

12 December 2020

inferred from PubMed ID database lookup

Delayed DNA methylation is an integral feature of DNA replication in mammalian cells

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/25411882

12 December 2020

inferred from PubMed ID database lookup

1 reference

https://pubmed.ncbi.nlm.nih.gov/25411882

12 December 2020

inferred from PubMed ID database lookup

Identifiers

DOI

10.1038/NCHEM.2064

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25411882%20AND%20SRC:MED&resulttype=core&format=json

release_frdyhik4kbem7g6wov7jriuxb4

23 February 2020

Fatcat ID

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Fatcat

https://api.fatcat.wiki/v0/release/frdyhik4kbem7g6wov7jriuxb4

24 November 2022

mapped directly with Wikidata item

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25411882%20AND%20SRC:MED&resulttype=core&format=json

23 February 2020

1 reference