Origin and domestication of papaya Yh chromosome (Q35238271)

7 August 2017

Origin and domestication of papaya Yh chromosome (English)

1 reference

7 August 2017

1 reference

20

Deborah Charlesworth

1 reference

7 August 2017

Robert VanBuren

1

1 reference

7 August 2017

Fanchang Zeng

2

1 reference

7 August 2017

Cuixia Chen

3

1 reference

7 August 2017

Jisen Zhang

4

1 reference

7 August 2017

Ching Man Wai

5

1 reference

7 August 2017

Jennifer Han

6

1 reference

7 August 2017

Rishi Aryal

7

1 reference

7 August 2017

Andrea R Gschwend

8

1 reference

7 August 2017

Jianping Wang

9

1 reference

7 August 2017

Jong-Kuk Na

10

1 reference

7 August 2017

Lixian Huang

11

1 reference

7 August 2017

Lingmao Zhang

12

1 reference

7 August 2017

Wenjing Miao

13

1 reference

7 August 2017

Jiqing Gou

14

1 reference

7 August 2017

Jie Arro

15

1 reference

7 August 2017

Romain Guyot

16

1 reference

7 August 2017

Richard C Moore

17

1 reference

7 August 2017

Ming-Li Wang

18

1 reference

7 August 2017

Francis Zee

19

1 reference

7 August 2017

Paul H Moore

21

1 reference

7 August 2017

Qingyi Yu

22

1 reference

7 August 2017

Ray Ming

23

1 reference

7 August 2017

11 March 2015

1 reference

7 August 2017

1 reference

7 August 2017

25

1 reference

7 August 2017

4

1 reference

7 August 2017

524-533

1 reference

Complex evolutionary trajectories of sex chromosomes across bird taxa

7 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4381524

Sex determination: why so many ways of doing it?

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4381524

Accumulation of interspersed and sex-specific repeats in the non-recombining region of papaya sex chromosomes

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4381524

Mammalian Y chromosomes retain widely expressed dosage-sensitive regulators

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4381524

Sequencing papaya X and Yh chromosomes reveals molecular basis of incipient sex chromosome evolution

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4381524

Contrasting patterns of X/Y polymorphism distinguish Carica papaya from other sex chromosome systems

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4381524

Sex-specific adaptation drives early sex chromosome evolution in Drosophila

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4381524

A program for annotating and predicting the effects of single nucleotide polymorphisms, SnpEff: SNPs in the genome of Drosophila melanogaster strain w1118; iso-2; iso-3

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4381524

Narrowing Down the Mapping of Plant Sex-Determination Regions Using New Y-Chromosome-Specific Markers and Heavy-Ion Beam Irradiation-Induced Y-Deletion Mutants in Silene latifolia

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4381524

Strict evolutionary conservation followed rapid gene loss on human and rhesus Y chromosomes

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4381524

Construction of papaya male and female BAC libraries and application in physical mapping of the sex chromosomes

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4381524

Sex chromosomes in land plants

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4381524

SyMAP v3.4: a turnkey synteny system with application to plant genomes

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4381524

Dated molecular phylogenies indicate a Miocene origin for Arabidopsis thaliana

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4381524

Patterns of neutral genetic variation on recombining sex chromosomes

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4381524

Chimpanzee and human Y chromosomes are remarkably divergent in structure and gene content

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4381524

The rate and molecular spectrum of spontaneous mutations in Arabidopsis thaliana

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4381524

Tablet--next generation sequence assembly visualization

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4381524

Bayesian inference of species trees from multilocus data

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4381524

The Sequence Alignment/Map format and SAMtools

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4381524

Fast and accurate short read alignment with Burrows-Wheeler transform

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4381524

Fundamental concepts in genetics: Effective population size and patterns of molecular evolution and variation

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4381524

Bird-like sex chromosomes of platypus imply recent origin of mammal sex chromosomes

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4381524

The draft genome of the transgenic tropical fruit tree papaya (Carica papaya Linnaeus).

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4381524

Defining regions and rearrangements of the Silene latifolia Y chromosome.

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4381524

Balancing selection and its effects on sequences in nearby genome regions

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4381524

Extreme population structure and high interspecific divergence of the Silene Y chromosome

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4381524

GeneMark: web software for gene finding in prokaryotes, eukaryotes and viruses

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4381524

Detecting the number of clusters of individuals using the software STRUCTURE: a simulation study

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4381524

Mauve: multiple alignment of conserved genomic sequence with rearrangements

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4381524

AUGUSTUS: a web server for gene finding in eukaryotes

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4381524

MUSCLE: multiple sequence alignment with high accuracy and high throughput

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4381524

Inference of population structure using multilocus genotype data: linked loci and correlated allele frequencies

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4381524

Unravelling angiosperm genome evolution by phylogenetic analysis of chromosomal duplication events

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4381524

Origin and environmental setting of ancient agriculture in the lowlands of Mesoamerica

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4381524

Sexual dimorphism in white campion: complex control of carpel number is revealed by y chromosome deletions

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4381524

Measures of divergence between populations and the effect of forces that reduce variability.

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4381524

Statistical method for testing the neutral mutation hypothesis by DNA polymorphism

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4381524

Genome sequence comparison reveals a candidate gene involved in male-hermaphrodite differentiation in papaya (Carica papaya) trees.

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4381524

Origins and functional evolution of Y chromosomes across mammals

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4381524

Genetic mapping of sex determination in a wild strawberry, Fragaria virginiana, reveals earliest form of sex chromosome.

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4381524

A primitive Y chromosome in papaya marks incipient sex chromosome evolution.

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4381524

The genomic architecture of sexual dimorphism in the dioecious plant Silene latifolia

26 September 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/25762551

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

ESTIMATING F-STATISTICS FOR THE ANALYSIS OF POPULATION STRUCTURE.

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/25762551

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1101/GR.183905.114

1 reference

7 August 2017

1 reference

7 August 2017

1 reference