A 5-methylcytosine DNA glycosylase/lyase demethylates the retrotransposon Tos17 and promotes its transposition in rice. (Q35216900)

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12 February 2020

title

A 5-methylcytosine DNA glycosylase/lyase demethylates the retrotransposon Tos17 and promotes its transposition in rice (English)

1 reference

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12 February 2020

0 references

8

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12 February 2020

Gyan P Mishra

3

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12 February 2020

Jian-Kang Zhu

10

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12 February 2020

author name string

Honggui La

1

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12 February 2020

Bo Ding

2

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12 February 2020

Bo Zhou

4

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12 February 2020

Hongmei Yang

5

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12 February 2020

Maria del Rosario Bellizzi

6

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12 February 2020

Songbiao Chen

7

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12 February 2020

Zhaohua Peng

9

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12 February 2020

Guo-Liang Wang

11

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12 February 2020

language of work or name

English

0 references

publication date

6 September 2011

1 reference

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Proceedings of the National Academy of Sciences of the United States of America

12 February 2020

number of pages

6

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based on heuristic

inferred from page(s)

published in

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12 February 2020

volume

108

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issue

37

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12 February 2020

page(s)

15498-15503

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Hydroxylation of 5-methylcytosine by TET1 promotes active DNA demethylation in the adult brain

12 February 2020

cites work

1 reference

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Local DNA hypomethylation activates genes in rice endosperm

13 July 2018

1 reference

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Active DNA demethylation: many roads lead to Rome.

13 July 2018

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Active DNA demethylation mediated by DNA glycosylases

13 July 2018

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Genome-wide demethylation of Arabidopsis endosperm.

13 July 2018

1 reference

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DNA demethylation in zebrafish involves the coupling of a deaminase, a glycosylase, and gadd45.

13 July 2018

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ROS3 is an RNA-binding protein required for DNA demethylation in Arabidopsis.

13 July 2018

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Highly integrated single-base resolution maps of the epigenome in Arabidopsis

13 July 2018

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DNA demethylation in the Arabidopsis genome.

13 July 2018

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Role of the Arabidopsis DNA glycosylase/lyase ROS1 in active DNA demethylation

13 July 2018

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DEMETER and REPRESSOR OF SILENCING 1 encode 5-methylcytosine DNA glycosylases.

13 July 2018

1 reference

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DEMETER DNA glycosylase establishes MEDEA polycomb gene self-imprinting by allele-specific demethylation.

13 July 2018

1 reference

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Preventing transcriptional gene silencing by active DNA demethylation

13 July 2018

1 reference

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Mobilization of transposons by a mutation abolishing full DNA methylation in Arabidopsis

13 July 2018

1 reference

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Analysis of the genome sequence of the flowering plant Arabidopsis thaliana

13 July 2018

1 reference

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Retrotransposons of rice involved in mutations induced by tissue culture

13 July 2018

1 reference

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Selective epigenetic control of retrotransposition in Arabidopsis.

13 July 2018

1 reference

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Bursts of retrotransposition reproduced in Arabidopsis

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3174586

Arabidopsis DEMETER-LIKE proteins DML2 and DML3 are required for appropriate distribution of DNA methylation marks.

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3174586

NucPred--predicting nuclear localization of proteins.

26 September 2018

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SDG714, a histone H3K9 methyltransferase, is involved in Tos17 DNA methylation and transposition in rice.

26 September 2018

1 reference

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The DNA glycosylase/lyase ROS1 functions in pruning DNA methylation patterns in Arabidopsis.

26 September 2018

1 reference

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Activation of a rice endogenous retrotransposon Tos17 in tissue culture is accompanied by cytosine demethylation and causes heritable alteration in methylation pattern of flanking genomic regions

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3174586

Target site specificity of the Tos17 retrotransposon shows a preference for insertion within genes and against insertion in retrotransposon-rich regions of the genome.

26 September 2018

1 reference

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Role of CG and non-CG methylation in immobilization of transposons in Arabidopsis

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3174586

ROS1, a repressor of transcriptional gene silencing in Arabidopsis, encodes a DNA glycosylase/lyase

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3174586

DEMETER, a DNA glycosylase domain protein, is required for endosperm gene imprinting and seed viability in arabidopsis.

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3174586

26 September 2018

Decoding the rice genome

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21896764

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Epigenetic regulation of the rice retrotransposon Tos17

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21896764

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1073/PNAS.1112704108

1 reference

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12 February 2020

0 references

1 reference

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12 February 2020

1 reference