CAVER Analyst 1.0: graphic tool for interactive visualization and analysis of tunnels and channels in protein structures. (Q35176321)

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19 March 2020

title

CAVER Analyst 1.0: graphic tool for interactive visualization and analysis of tunnels and channels in protein structures (English)

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19 March 2020

4

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19 March 2020

Ondrej Strnad

5

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19 March 2020

Lukas Daniel

6

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19 March 2020

David Bednář

7

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19 March 2020

Martin Manak

9

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19 March 2020

Artur Góra

13

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19 March 2020

Jiří Damborský

14

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19 March 2020

1

Barbora Kozlikova

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19 March 2020

author name string

Eva Sebestova

2

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19 March 2020

Vilem Sustr

3

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19 March 2020

Antonin Pavelka

8

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19 March 2020

Martin Bezdeka

10

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19 March 2020

Petr Benes

11

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19 March 2020

Matus Kotry

12

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19 March 2020

Jiri Sochor

15

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19 March 2020

language of work or name

English

0 references

publication date

29 May 2014

1 reference

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19 March 2020

number of pages

2

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based on heuristic

inferred from page(s)

published in

Bioinformatics

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19 March 2020

volume

30

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19 March 2020

issue

18

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19 March 2020

page(s)

2684-2685

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MOLEonline 2.0: interactive web-based analysis of biomacromolecular channels

19 March 2020

cites work

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTU364

Software tools for identification, visualization and analysis of protein tunnels and channels.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTU364

CAVER 3.0: a tool for the analysis of transport pathways in dynamic protein structures

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTU364

Identification of tunnels in proteins, nucleic acids, inorganic materials and molecular ensembles.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTU364

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTU364

Molecular dynamics simulations of biomolecules

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTU364

Pathways and mechanisms for product release in the engineered haloalkane dehalogenases explored using classical and random acceleration molecular dynamics simulations.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTU364

Engineering enzyme stability and resistance to an organic cosolvent by modification of residues in the access tunnel

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTU364

Redesigning dehalogenase access tunnels as a strategy for degrading an anthropogenic substrate

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTU364

PoreWalker: a novel tool for the identification and characterization of channels in transmembrane proteins from their three-dimensional structure

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTU364

Protein structure alignment by incremental combinatorial extension (CE) of the optimal path

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTU364

MolAxis: a server for identification of channels in macromolecules

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTU364

10.1093/BIOINFORMATICS/BTU364

21 January 2018

Identifiers

DOI

1 reference

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journals/bioinformatics/KozlikovaSSBSDBPMBBKGDS14

19 March 2020

DBLP publication ID

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24876375%20AND%20SRC:MED&resulttype=core&format=json