Identification of candidate genes involved in coronary artery calcification by transcriptome sequencing of cell lines (Q35120692)

6 August 2017

Identification of candidate genes involved in coronary artery calcification by transcriptome sequencing of cell lines (English)

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NISC Comparative Sequencing Program

6 August 2017

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8

object named as

NISC Comparative Sequencing Program

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6 August 2017

17

Leslie G Biesecker

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6 August 2017

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Eric D Green

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6 August 2017

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James C Mullikin

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6 August 2017

13

Andrew E Arai

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6 August 2017

9

Frank D Kolodgie

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6 August 2017

3

Praveen F Cherukuri

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6 August 2017

7

Shih-Queen Lee-Lin

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6 August 2017

4

David S Accame

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6 August 2017

Shurjo K Sen

1

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6 August 2017

Jennifer J Barb

2

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6 August 2017

Abdel G Elkahloun

5

1 reference

6 August 2017

Larry N Singh

6

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6 August 2017

Qi Cheng

10

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6 August 2017

XiaoQing Zhao

11

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6 August 2017

Marcus Y Chen

12

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6 August 2017

Peter J Munson

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6 August 2017

language of work or name

English

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publication date

14 March 2014

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6 August 2017

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15

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6 August 2017

198

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describes a project that uses

6 August 2017

edgeR

object named as

edgeR Bioconductor

edgeR

Bioconductor package edgeR

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CZ Software Mentions: A large dataset of software mentions in the biomedical literature

edgeR

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exact match

https://scigraph.springernature.com/pub.10.1186/1471-2164-15-198

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cites work

A systematic comparison and evaluation of high density exon arrays and RNA-seq technology used to unravel the peripheral blood transcriptome of sickle cell disease

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4003819

Genome-wide association study of coronary artery disease in the Japanese

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4003819

Meta-analysis of genome-wide association studies from the CHARGE consortium identifies common variants associated with carotid intima media thickness and plaque

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4003819

Differential expression in RNA-seq: a matter of depth

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4003819

The reality of pervasive transcription

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4003819

Human oral, gut, and plaque microbiota in patients with atherosclerosis

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4003819

Evaluation of statistical methods for normalization and differential expression in mRNA-Seq experiments

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4003819

MMP-7 mediates cleavage of N-cadherin and promotes smooth muscle cell apoptosis

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4003819

Multi-organ expression profiling uncovers a gene module in coronary artery disease involving transendothelial migration of leukocytes and LIM domain binding 2: the Stockholm Atherosclerosis Gene Expression (STAGE) study

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4003819

edgeR: a Bioconductor package for differential expression analysis of digital gene expression data

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4003819

Expression quantitative trait loci detected in cell lines are often present in primary tissues

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4003819

The ClinSeq Project: piloting large-scale genome sequencing for research in genomic medicine

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4003819

TopHat: discovering splice junctions with RNA-Seq

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4003819

The role of coronary artery calcification score in clinical practice

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4003819

High-resolution mapping of expression-QTLs yields insight into human gene regulation

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4003819

Coronary artery calcification compared with carotid intima-media thickness in the prediction of cardiovascular disease incidence: the Multi-Ethnic Study of Atherosclerosis (MESA).

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4003819

Transcriptional profiling uncovers a network of cholesterol-responsive atherosclerosis target genes

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4003819

T cells in atherogenesis: for better or for worse?

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4003819

Genome-wide expression studies of atherosclerosis: critical issues in methodology, analysis, interpretation of transcriptomics data

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4003819

Genetics of atherosclerosis

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4003819

Matrilysin is expressed by lipid-laden macrophages at sites of potential rupture in atherosclerotic lesions and localizes to areas of versican deposition, a proteoglycan substrate for the enzyme

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4003819

Quantification of coronary artery calcium using ultrafast computed tomography.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4003819

The beginning of the end for microarrays?

28 July 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-15-198

BEDTools: a flexible suite of utilities for comparing genomic features

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-15-198

Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-15-198

2010 ACCF/AHA guideline for assessment of cardiovascular risk in asymptomatic adults: a report of the American College of Cardiology Foundation/American Heart Association Task Force on Practice Guidelines

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-15-198

Evaluation of DNA microarray results with quantitative gene expression platforms

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-15-198

Genetics in arterial calcification: pieces of a puzzle and cogs in a wheel

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-15-198

Distribution of coronary artery calcium by race, gender, and age: results from the Multi-Ethnic Study of Atherosclerosis (MESA).

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4003819

Increased Plasma Concentration of Matrix Metalloproteinase-7 in Patients with Coronary Artery Disease

27 September 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-15-198

2010 ACCF/AHA Guideline for Assessment of Cardiovascular Risk in Asymptomatic Adults: Executive Summary: A Report of the American College of Cardiology Foundation/American Heart Association Task Force on Practice Guidelines

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4003819

16 November 2018

Identifiers

DOI

10.1186/1471-2164-15-198

1 reference

Dimensions Publication ID

6 August 2017

0 references

1 reference

6 August 2017

1 reference