Metabolic differences in ripening of Solanum lycopersicum 'Ailsa Craig' and three monogenic mutants (Q35066478)

6 August 2017

Metabolic differences in ripening of Solanum lycopersicum 'Ailsa Craig' and three monogenic mutants (English)

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S-adenosyl-L-homocysteine

6 August 2017

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4-hydroxycinnamyl alcohol

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cis-2-hydroxypenta-2,4-dienoic acid

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D-arabinono-1,4-lactone

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(R)-3-hydroxy-2-oxo-4-phosphonooxybutanoic acid

1 reference

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caffeic acid 3-glucoside

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2-C-methylerythritol 4-phosphate

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3-(imidazol-4-yl)-2-oxopropyl dihydrogen phosphate

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sucrose 6'-phosphate (P on 5-ring)

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α-ketoisocaproic acid

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4-hydroxybenzoic acid

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inferred from

reverse claim

6H-dibenzo[b,d]pyran-6-one

1 reference

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dihydroxyacetone phosphate

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6-phospho-D-gluconic acid

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alpha-ketoglutaric acid

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(S)-pyroglutamic acid

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13

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6 August 2017

1

Stephan Beisken

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Reza M. Salek

12

object named as

Reza M Salek

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Charlie Hodgman

object named as

Charlie Hodgman

7

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author name string

Mark Earll

2

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6 August 2017

Charles Baxter

3

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6 August 2017

David Portwood

4

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6 August 2017

Zsuzsanna Ament

5

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6 August 2017

Aniko Kende

6

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6 August 2017

Graham Seymour

8

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6 August 2017

Rebecca Smith

9

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6 August 2017

Paul Fraser

10

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6 August 2017

Mark Seymour

11

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6 August 2017

16 September 2014

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full work available at URL

6 August 2017

https://www.nature.com/articles/sdata201429.pdf

1 reference

19 March 2024

https://api.unpaywall.org/v2/10.1038/sdata.2014.29?email=unpaywall_01@example.com

published in

Scientific Data

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6 August 2017

1

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6 August 2017

140029

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6 August 2017

1

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http://api.crossref.org/works/10.1038%2Fsdata.2014.29

copyright license

Creative Commons Attribution 4.0 International

start time

16 September 2014

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April 2022 Public Data File from Crossref

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1 reference

19 March 2024

https://api.unpaywall.org/v2/10.1038/sdata.2014.29?email=unpaywall_01@example.com

access restriction status

open access

1 reference

based on heuristic

inferred from online access status

exact match

https://scigraph.springernature.com/pub.10.1038/sdata.2014.29

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cites work

MassCascade: Visual Programming for LC-MS Data Processing in Metabolomics

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4322568

A genome-wide metabolomic resource for tomato fruit from Solanum pennellii

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4322568

KNIME-CDK: Workflow-driven cheminformatics

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4322568

Liquid chromatography-mass spectrometry in metabolomics research: mass analyzers in ultra high pressure liquid chromatography coupling

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4322568

Fruit development and ripening

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4322568

MetaboLights--an open-access general-purpose repository for metabolomics studies and associated meta-data

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4322568

MetaboLights: towards a new COSMOS of metabolomics data management

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4322568

Mass spectrometry-based metabolomics towards understanding of gene functions with a diversity of biological contexts

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4322568

The tomato genome sequence provides insights into fleshy fruit evolution

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4322568

Covering chemical diversity of genetically-modified tomatoes using metabolomics for objective substantial equivalence assessment

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4322568

Tackling the widespread and critical impact of batch effects in high-throughput data

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4322568

ISA software suite: supporting standards-compliant experimental annotation and enabling curation at the community level

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4322568

MZmine 2: modular framework for processing, visualizing, and analyzing mass spectrometry-based molecular profile data

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4322568

myExperiment: a repository and social network for the sharing of bioinformatics workflows

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4322568

A retention-time-shift-tolerant background subtraction and noise reduction algorithm (BgS-NoRA) for extraction of drug metabolites in liquid chromatography/mass spectrometry data from biological matrices

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4322568

ProteoWizard: open source software for rapid proteomics tools development

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4322568

Metabolite profile analysis: from raw data to regression and classification

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4322568

An integrated view of quantitative trait variation using tomato interspecific introgression lines

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4322568

pcaMethods--a bioconductor package providing PCA methods for incomplete data

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4322568

Chromatographic alignment of ESI-LC-MS proteomics data sets by ordered bijective interpolated warping.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4322568

Metabolic regulation underlying tomato fruit development

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4322568

XCMS: processing mass spectrometry data for metabolite profiling using nonlinear peak alignment, matching, and identification

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4322568

Integrated analysis of metabolite and transcript levels reveals the metabolic shifts that underlie tomato fruit development and highlight regulatory aspects of metabolic network behavior.

8 July 2018

1 reference

https://api.crossref.org/works/10.1038%2FSDATA.2014.29

The tomato FRUITFULL homologs TDR4/FUL1 and MBP7/FUL2 regulate ethylene-independent aspects of fruit ripening

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FSDATA.2014.29

Targeted systems biology profiling of tomato fruit reveals coordination of the Yang cycle and a distinct regulation of ethylene biosynthesis during postclimacteric ripening.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FSDATA.2014.29

Conserved changes in the dynamics of metabolic processes during fruit development and ripening across species

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FSDATA.2014.29

Analytical error reduction using single point calibration for accurate and precise metabolomic phenotyping.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FSDATA.2014.29

Statistical strategies for avoiding false discoveries in metabolomics and related experiments

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FSDATA.2014.29

21 January 2018

Identifiers

DOI

10.1038/SDATA.2014.29

1 reference

Dimensions Publication ID

6 August 2017

0 references

1 reference

6 August 2017

1 reference