LineUp: statistical detection of chromosomal homology with application to plant comparative genomics (Q35020894)

5 August 2017

LineUp: statistical detection of chromosomal homology with application to plant comparative genomics (English)

1 reference

5 August 2017

0 references

1 reference

2

1 reference

5 August 2017

4

Pierre Baldi

1 reference

5 August 2017

3

Brandon Gaut

1 reference

5 August 2017

Steve Hampson

1

1 reference

5 August 2017

14 April 2003

1 reference

5 August 2017

1 reference

5 August 2017

13

1 reference

5 August 2017

999-1010

1 reference

5 August 2017

5

1 reference

Intragenic recombination in maize: pollen analysis methods and the effect of parental adh1 isoalleles.

5 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=430881

Identification of the genomic locations of duplicate nucleotide sequences in maize by analysis of restriction fragment length polymorphisms.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=430881

Gene order evolution and paleopolyploidy in hemiascomycete yeasts

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=430881

Intraspecific violation of genetic colinearity and its implications in maize

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=430881

Recombination rates between adjacent genic and retrotransposon regions in maize vary by 2 orders of magnitude

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=430881

Yesterday's polyploids and the mystery of diploidization

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=430881

Determination of the number of conserved chromosomal segments between species.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=430881

Genome alignment, evolution of prokaryotic genome organization, and prediction of gene function using genomic context

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=430881

Patterns of chromosomal duplication in maize and their implications for comparative maps of the grasses

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=430881

Analysis of the genome sequence of the flowering plant Arabidopsis thaliana

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=430881

Prevalence of small inversions in yeast gene order evolution

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=430881

Comparative sequence analysis of plant nuclear genomes:m microcolinearity and its many exceptions

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=430881

Estimation of synteny conservation and genome compaction between pufferfish (Fugu) and human

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=430881

Genome organization in dicots: genome duplication in Arabidopsis and synteny between soybean and Arabidopsis

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=430881

Genome evolution in polyploids

8 July 2018

2 references

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=430881

8 July 2018

https://pubmed.ncbi.nlm.nih.gov/12695327

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Comparative genomics, marker density and statistical analysis of chromosome rearrangements

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=430881

A chromosome-based model for estimating the number of conserved segments between pairs of species from comparative genetic maps

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=430881

Inferences on the genome structure of progenitor maize through comparative analysis of rice, maize and the domesticated panicoids

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=430881

A maize map standard with sequenced core markers, grass genome reference points and 932 expressed sequence tagged sites (ESTs) in a 1736-locus map.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=430881

Conserved segment identification.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=430881

Comparative genome organization of vertebrates. The First International Workshop on Comparative Genome Organization.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=430881

Comparative linkage maps of the rice and maize genomes

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=430881

Cereal genome evolution. Grasses, line up and form a circle

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=430881

Lengths of chromosomal segments conserved since divergence of man and mouse

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=430881

Duplicate sequences with a similarity to expressed genes in the genome of Arabidopsis thaliana.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=430881

The origins of genomic duplications in Arabidopsis.

25 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=430881

Genome maps 10. Comparative genomics. Mammalian radiations. Wall chart

25 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=430881

The dynamics of chromosome evolution in birds and mammals

25 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/12695327

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

The lengths of undiscovered conserved segments in comparative maps

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/12695327

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1101/GR.814403

1 reference

5 August 2017

1 reference

5 August 2017

1 reference

PubMed ID

12695327