Stepwise assembly of the Nova-regulated alternative splicing network in the vertebrate brain. (Q34750107)

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25 January 2020

title

Stepwise assembly of the Nova-regulated alternative splicing network in the vertebrate brain (English)

1 reference

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alternative mRNA splicing, via spliceosome

25 January 2020

main subject

1 reference

1

1 reference

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25 January 2020

Ildiko Somorjai

4

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25 January 2020

José María Martín-Durán

5

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25 January 2020

Grigory Genikhovich

6

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25 January 2020

Senda Jiménez-Delgado

7

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25 January 2020

Ulrich Technau

8

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25 January 2020

Gemma Marfany

10

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25 January 2020

Jordi Garcia-fernandez

11

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25 January 2020

2

Amanda Denuc

1 reference

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25 January 2020

3

Demián Burguera

1 reference

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25 January 2020

9

Scott W Roy

1 reference

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25 January 2020

language of work or name

English

0 references

publication date

9 March 2011

1 reference

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Proceedings of the National Academy of Sciences of the United States of America

25 January 2020

published in

1 reference

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25 January 2020

volume

108

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25 January 2020

page(s)

5319-5324

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25 January 2020

issue

13

1 reference

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Conservation of an RNA regulatory map between Drosophila and mammals

25 January 2020

cites work

1 reference

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Conserved developmental expression of Fezf in chordates and Drosophila and the origin of the Zona Limitans Intrathalamica (ZLI) brain organizer

7 July 2018

1 reference

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Integrative modeling defines the Nova splicing-regulatory network and its combinatorial controls

7 July 2018

1 reference

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Internal and external paralogy in the evolution of tropomyosin genes in metazoans

7 July 2018

1 reference

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Regulation of vertebrate nervous system alternative splicing and development by an SR-related protein

7 July 2018

1 reference

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ESRP1 and ESRP2 are epithelial cell-type-specific regulators of FGFR2 splicing

7 July 2018

1 reference

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Quantitative regulation of alternative splicing in evolution and development

7 July 2018

1 reference

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HITS-CLIP yields genome-wide insights into brain alternative RNA processing

7 July 2018

1 reference

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Defining the regulatory network of the tissue-specific splicing factors Fox-1 and Fox-2.

7 July 2018

1 reference

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Evolution of Nova-dependent splicing regulation in the brain

7 July 2018

1 reference

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Global analysis of patterns of gene expression during Drosophila embryogenesis

7 July 2018

1 reference

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A post-transcriptional regulatory switch in polypyrimidine tract-binding proteins reprograms alternative splicing in developing neurons

7 July 2018

1 reference

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A global view of gene expression in lithium and zinc treated sea urchin embryos: new components of gene regulatory networks

7 July 2018

1 reference

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Tunicates and not cephalochordates are the closest living relatives of vertebrates

7 July 2018

1 reference

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Nova regulates brain-specific splicing to shape the synapse

7 July 2018

1 reference

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Understanding alternative splicing: towards a cellular code

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3069165

ProtTest: selection of best-fit models of protein evolution

7 July 2018

1 reference

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Hemichordate embryos: procurement, culture, and basic methods

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3069165

Variation in alternative splicing across human tissues

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3069165

A Simple, Fast, and Accurate Algorithm to Estimate Large Phylogenies by Maximum Likelihood

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3069165

MrBayes 3: Bayesian phylogenetic inference under mixed models

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3069165

pasilla, the Drosophila homologue of the human Nova-1 and Nova-2 proteins, is required for normal secretion in the salivary gland

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3069165

MRBAYES: Bayesian inference of phylogenetic trees

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3069165

The neuronal RNA-binding protein Nova-2 is implicated as the autoantigen targeted in POMA patients with dementia

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3069165

Using CLUSTAL for multiple sequence alignments

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3069165

The onconeural antigen Nova-1 is a neuron-specific RNA-binding protein, the activity of which is inhibited by paraneoplastic antibodies

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3069165

Nova, the paraneoplastic Ri antigen, is homologous to an RNA-binding protein and is specifically expressed in the developing motor system

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3069165

An RNA map predicting Nova-dependent splicing regulation.

7 July 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1012333108

islet reveals segmentation in the Amphioxus hindbrain homolog.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1012333108

The cholinergic gene locus in amphioxus: molecular characterization and developmental expression patterns.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1012333108

Expression pattern of three putative RNA-binding proteins during early development of the sea urchin Paracentrotus lividus.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1012333108

Alternative splicing in the human, mouse and rat genomes is associated with an increased frequency of exon creation and/or loss

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1012333108

PAL: an object-oriented programming library for molecular evolution and phylogenetics.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1012333108

Gene expansion and retention leads to a diverse tyrosine kinase superfamily in amphioxus

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1012333108

High qualitative and quantitative conservation of alternative splicing in Caenorhabditis elegans and Caenorhabditis briggsae.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1012333108

Odd-skipped genes encode repressors that control kidney development.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1012333108

Amphioxus whole-mount in situ hybridization.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3069165

In situ hybridization of starlet sea anemone (Nematostella vectensis) embryos, larvae, and polyps.

26 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3069165

Widespread Evolutionary Conservation of Alternatively Spliced Exons in Caenorhabditis

26 October 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1012333108

Germ layer specification and axial patterning in the embryonic development of the freshwater planarian Schmidtea polychroa

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21389270

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1073/PNAS.1012333108

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21389270%20AND%20SRC:MED&resulttype=core&format=json

25 January 2020

0 references

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21389270%20AND%20SRC:MED&resulttype=core&format=json

25 January 2020

1 reference