JiffyNet: a web-based instant protein network modeler for newly sequenced species (Q34728012)

4 August 2017

JiffyNet: a web-based instant protein network modeler for newly sequenced species (English)

1 reference

4 August 2017

3

Insuk Lee

1 reference

4 August 2017

Eiru Kim

1

1 reference

PubMed ID

23685435

4 August 2017

Hanhae Kim

series ordinal

2

1 reference

PubMed ID

23685435

4 August 2017

language of work or name

English

0 references

publication date

17 May 2013

1 reference

4 August 2017

Nucleic Acids Research

1 reference

4 August 2017

41

1 reference

4 August 2017

Web Server issue

1 reference

4 August 2017

W192-7

1 reference

Creative Commons Attribution 3.0 Unported

4 August 2017

start time

4 October 2016

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

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1 reference

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KEGG for integration and interpretation of large-scale molecular data sets

7 July 2018

1 reference

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Genetic dissection of the biotic stress response using a genome-scale gene network for rice.

7 July 2018

1 reference

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Prioritizing candidate disease genes by network-based boosting of genome-wide association data.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3692116

Probabilistic functional gene societies

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3692116

Cytoscape Web: an interactive web-based network browser

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3692116

Predicting genetic modifier loci using functional gene networks

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3692116

Rational association of genes with traits using a genome-scale gene network for Arabidopsis thaliana

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3692116

Genome 10K: a proposal to obtain whole-genome sequence for 10,000 vertebrate species

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3692116

A transcriptome atlas of rice cell types uncovers cellular, functional and developmental hierarchies

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3692116

Broad network-based predictability of Saccharomyces cerevisiae gene loss-of-function phenotypes

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3692116

An improved, bias-reduced probabilistic functional gene network of baker's yeast, Saccharomyces cerevisiae

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3692116

Integrative molecular concept modeling of prostate cancer progression.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3692116

Benchmarking ortholog identification methods using functional genomics data

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3692116

Annotation transfer between genomes: protein-protein interologs and protein-DNA regulogs

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3692116

A Bayesian framework for combining heterogeneous data sources for gene function prediction (in Saccharomyces cerevisiae).

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3692116

Automatic clustering of orthologs and in-paralogs from pairwise species comparisons

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3692116

Gene ontology: tool for the unification of biology

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3692116

A single gene network accurately predicts phenotypic effects of gene perturbation in Caenorhabditis elegans.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3692116

A probabilistic functional network of yeast genes

26 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/23685435

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1093/NAR/GKT419

1 reference

4 August 2017

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference

4 August 2017

1 reference

PubMed ID

23685435