High-resolution structure of the Shigella type-III secretion needle by solid-state NMR and cryo-electron microscopy (Q34610814)

3 August 2017

High-resolution structure of the Shigella type-III secretion needle by solid-state NMR and cryo-electron microscopy (English)

1 reference

cryogenic electron microscopy

3 August 2017

0 references

3

Antoine Loquet

1 reference

3 August 2017

Birgit Habenstein

2

0 references

David Baker

object named as

David Baker

7

0 references

author name string

Jean-Philippe Demers

1

1 reference

3 August 2017

Suresh Kumar Vasa

4

1 reference

3 August 2017

Karin Giller

5

1 reference

3 August 2017

Stefan Becker

6

1 reference

3 August 2017

Adam Lange

8

1 reference

3 August 2017

Nikolaos G Sgourakis

9

1 reference

3 August 2017

language of work or name

English

0 references

publication date

29 September 2014

1 reference

3 August 2017

Nature Communications

1 reference

3 August 2017

5

1 reference

3 August 2017

4976

1 reference

https://scigraph.springernature.com/pub.10.1038/ncomms5976

3 August 2017

0 references

cites work

Atomic structure and handedness of the building block of a biological assembly

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4251803

Structure of a pathogenic type 3 secretion system in action

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4251803

Solid-state NMR spectroscopy structure determination of a lipid-embedded heptahelical membrane protein

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4251803

The common structural architecture of Shigella flexneri and Salmonella typhimurium type three secretion needles

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4251803

Solid-state NMR spectroscopy of proteins

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4251803

Structural investigations of molecular machines by solid-state NMR.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4251803

Biomolecular magic-angle spinning solid-state NMR: recent methods and applications

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4251803

Biochemistry. Integrative structural biology

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4251803

Advances in integrative modeling of biomolecular complexes

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4251803

Membrane-protein structure determination by solid-state NMR spectroscopy of microcrystals

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4251803

Atomic model of the type III secretion system needle

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4251803

Structure of a type III secretion needle at 7-A resolution provides insights into its assembly and signaling mechanisms

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4251803

A software framework for analysing solid-state MAS NMR data.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4251803

Modeling symmetric macromolecular structures in Rosetta3

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4251803

ROSETTA3: an object-oriented software suite for the simulation and design of macromolecules

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4251803

Solid-state NMR spectroscopy on complex biomolecules

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4251803

Cryo-EM of macromolecular assemblies at near-atomic resolution

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4251803

Atomic-resolution three-dimensional structure of HET-s(218-289) amyloid fibrils by solid-state NMR spectroscopy

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4251803

Conformational change of flagellin for polymorphic supercoiling of the flagellar filament

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4251803

The structure of the Salmonella typhimurium type III secretion system needle shows divergence from the flagellar system

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4251803

Simultaneous prediction of protein folding and docking at high resolution

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4251803

Characterization of different water pools in solid-state NMR protein samples

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4251803

Refinement of protein structures into low-resolution density maps using rosetta

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4251803

Jalview Version 2--a multiple sequence alignment editor and analysis workbench

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4251803

Free R value: a novel statistical quantity for assessing the accuracy of crystal structures

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4251803

Towards atomic resolution structural determination by single-particle cryo-electron microscopy

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4251803

Molecular pathogenesis of Shigella spp.: controlling host cell signaling, invasion, and death by type III secretion.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4251803

Type III secretion: more systems than you think

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4251803

The CCPN data model for NMR spectroscopy: development of a software pipeline

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4251803

A concept for rapid protein-structure determination by solid-state NMR spectroscopy.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4251803

Solution NMR structure of ribosome-binding factor A (RbfA), a cold-shock adaptation protein from Escherichia coli

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4251803

Helical structure of the needle of the type III secretion system of Shigella flexneri

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4251803

Protein NMR structure determination with automated NOE assignment using the new software CANDID and the torsion angle dynamics algorithm DYANA

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4251803

Electrostatics of nanosystems: application to microtubules and the ribosome

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4251803

Rupture, invasion and inflammatory destruction of the intestinal barrier by Shigella, making sense of prokaryote-eukaryote cross-talks

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4251803

NMRPipe: a multidimensional spectral processing system based on UNIX pipes

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4251803

Mass mapping with the scanning transmission electron microscope

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4251803

Studies on the MxiH protein in T3SS needles using DNP-enhanced ssNMR spectroscopy.

7 July 2018

1 reference

https://api.crossref.org/works/10.1038%2FNCOMMS5976

13C spin dilution for simplified and complete solid-state NMR resonance assignment of insoluble biological assemblies.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNCOMMS5976

Structural characterization of supramolecular assemblies by ¹³C spin dilution and 3D solid-state NMR.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNCOMMS5976

A straightforward method for stereospecific assignment of val and leu prochiral methyl groups by solid-state NMR: Scrambling in the [2-13C]Glucose labeling scheme.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNCOMMS5976

Efficient CO-CA transfer in highly deuterated proteins by band-selective homonuclear cross-polarization.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNCOMMS5976

Supramolecular interactions probed by 13C-13C solid-state NMR spectroscopy

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNCOMMS5976

Robust and highly accurate automatic NOESY assignment and structure determination with Rosetta.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNCOMMS5976

Supercycled SW(f)-TPPM sequence for heteronuclear dipolar decoupling in solid-state nuclear magnetic resonance.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNCOMMS5976

Swept-frequency two-pulse phase modulation (SWf-TPPM) sequences with linear sweep profile for heteronuclear decoupling in solid-state NMR.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNCOMMS5976

Improved chemical shift based fragment selection for CS-Rosetta using Rosetta3 fragment picker

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNCOMMS5976

[Structure of a bacterial nanomachine: the type 3 secretion system needle].

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4251803

Structural constraints from proton-mediated rare-spin correlation spectroscopy in rotating solids

26 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4251803

Determination of multiple ***φ***-torsion angles in proteins by selective and extensive (13)C labeling and two-dimensional solid-state NMR

26 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4251803

Fractional 13C enrichment of isolated carbons using [1-13C]- or [2-13C]-glucose facilitates the accurate measurement of dynamics at backbone Cα and side-chain methyl positions in proteins

26 October 2018

1 reference

https://api.crossref.org/works/10.1038%2FNCOMMS5976

An Improved Broadband Decoupling Sequence for Liquid Crystals and Solids

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/25264107

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Solution NMR of supramolecular complexes: providing new insights into function

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/25264107

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

The needle component of the type III secreton of Shigella regulates the activity of the secretion apparatus

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/25264107

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1038/NCOMMS5976

1 reference

Dimensions Publication ID

3 August 2017

0 references

0 references

1 reference

3 August 2017

1 reference