Thermodynamics of RNA-RNA binding (Q34489593)

2 August 2017

Thermodynamics of RNA-RNA binding (English)

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2 August 2017

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5

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2 August 2017

6

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2 August 2017

Hakim Tafer

2

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Jörg Hackermüller

object named as

Jörg Hackermüller

series ordinal

3

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Stephan H. Bernhart

series ordinal

4

object named as

Stephan H Bernhart

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2 August 2017

1

Ulrike Mückstein

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PubMed ID

16446276

2 August 2017

language of work or name

English

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publication date

29 January 2006

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2 August 2017

6

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based on heuristic

inferred from page(s)

published in

Bioinformatics

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2 August 2017

22

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2 August 2017

1177-1182

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2 August 2017

10

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Secondary structure prediction of interacting RNA molecules.

2 August 2017

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https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTL024

Prediction and validation of microRNAs and their targets

21 January 2018

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https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTL024

Principles of microRNA-target recognition

21 January 2018

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https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTL024

Prediction of hybridization and melting for double-stranded nucleic acids

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTL024

A statistical sampling algorithm for RNA secondary structure prediction

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTL024

Sfold web server for statistical folding and rational design of nucleic acids

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTL024

A partition function algorithm for nucleic acid secondary structure including pseudoknots

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTL024

An algorithm for computing nucleic acid base-pairing probabilities including pseudoknots

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTL024

siRNAs can function as miRNAs

21 January 2018

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https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTL024

Killing the messenger: short RNAs that silence gene expression

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTL024

Analysis of gene function in somatic mammalian cells using small interfering RNAs

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTL024

21 January 2018

Abstract shapes of RNA

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https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTL024

The effect of RNA secondary structures on RNA-ligand binding and the modifier RNA mechanism: a quantitative model.

21 January 2018

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https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTL024

Efficient computation of optimal oligo-RNA binding

21 January 2018

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https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTL024

Fast folding and comparison of RNA secondary structures

21 January 2018

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https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTL024

Vienna RNA secondary structure server

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTL024

Functional siRNAs and miRNAs Exhibit Strand Bias

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTL024

The activity of siRNA in mammalian cells is related to structural target accessibility: a comparison with antisense oligonucleotides

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTL024

Using an RNA secondary structure partition function to determine confidence in base pairs predicted by free energy minimization

21 January 2018

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https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTL024

Expanded sequence dependence of thermodynamic parameters improves prediction of RNA secondary structure

21 January 2018

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https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTL024

Predicting oligonucleotide affinity to nucleic acid targets

21 January 2018

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https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTL024

The equilibrium partition function and base pair binding probabilities for RNA secondary structure

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTL024

mRNA openers and closers: modulating AU-rich element-controlled mRNA stability by a molecular switch in mRNA secondary structure.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTL024

Mechanisms of gene silencing by double-stranded RNA

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTL024

Improving the efficiency of RNA interference in mammals

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTL024

Local RNA target structure influences siRNA efficacy: a systematic global analysis

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTL024

Structural insights into mRNA recognition from a PIWI domain-siRNA guide complex

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTL024

Fast and effective prediction of microRNA/target duplexes

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTL024

Rational siRNA design for RNA interference

21 January 2018

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https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTL024

Incorporating structure to predict microRNA targets

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTL024

Local RNA target structure influences siRNA efficacy: systematic analysis of intentionally designed binding regions

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTL024

Algorithm independent properties of RNA secondary structure predictions

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTL024

21 January 2018

RNA structure prediction

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTL024

Determination of thermodynamic parameters for HIV DIS type loop-loop kissing complexes

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTL024

Complete suboptimal folding of RNA and the stability of secondary structures.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTL024

Effects on RNAi of the tight structure, sequence and position of the targeted region.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTL024

MicroRNAs and small interfering RNAs can inhibit mRNA expression by similar mechanisms

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTL024

Calculating nucleic acid secondary structure.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTL024

Mfold web server for nucleic acid folding and hybridization prediction

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTL024

Optimal computer folding of large RNA sequences using thermodynamics and auxiliary information

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTL024

10.1093/BIOINFORMATICS/BTL024

21 January 2018

Identifiers

DOI

1 reference

journals/bioinformatics/MucksteinTHBSH06

2 August 2017

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DBLP Dataset 2021-01-02

28 January 2021

1 reference

PubMed ID

16446276