Functional analysis of yeast snoRNA and snRNA 3'-end formation mediated by uncoupling of cleavage and polyadenylation. (Q34302582)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11839805%20AND%20SRC:MED&resulttype=core&format=json

7 December 2019

title

Functional analysis of yeast snoRNA and snRNA 3'-end formation mediated by uncoupling of cleavage and polyadenylation (English)

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7 December 2019

4

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7 December 2019

author name string

Mariangela Morlando

1

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7 December 2019

Paolo Greco

2

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7 December 2019

Bernhard Dichtl

3

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7 December 2019

Walter Keller

5

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7 December 2019

Irene Bozzoni

6

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7 December 2019

language of work or name

English

0 references

publication date

1 March 2002

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Molecular and Cellular Biology

7 December 2019

published in

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7 December 2019

volume

22

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7 December 2019

page(s)

1379-1389

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7 December 2019

issue

5

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Release of U18 snoRNA from its host intron requires interaction of Nop1p with the Rnt1p endonuclease.

7 December 2019

cites work

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RNA-binding protein Nrd1 directs poly(A)-independent 3'-end formation of RNA polymerase II transcripts

6 July 2018

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6 July 2018

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Recognition of polyadenylation sites in yeast pre-mRNAs by cleavage and polyadenylation factor

6 July 2018

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A small nucleolar guide RNA functions both in 2'-O-ribose methylation and pseudouridylation of the U5 spliceosomal RNA

6 July 2018

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Cleavage/polyadenylation factor IA associates with the carboxyl-terminal domain of RNA polymerase II in Saccharomyces cerevisiae.

6 July 2018

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6 July 2018

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Yeast snoRNA accumulation relies on a cleavage-dependent/polyadenylation-independent 3'-processing apparatus

6 July 2018

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6 July 2018

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Small evolutionarily conserved RNA, resembling C/D box small nucleolar RNA, is transcribed from PWCR1, a novel imprinted gene in the Prader-Willi deletion region, which Is highly expressed in brain

6 July 2018

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Distinct roles of two Yth1p domains in 3'-end cleavage and polyadenylation of yeast pre-mRNAs

6 July 2018

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Homologs of small nucleolar RNAs in Archaea

6 July 2018

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Synthesis and assembly of the box C+D small nucleolar RNPs

6 July 2018

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A yeast heterogeneous nuclear ribonucleoprotein complex associated with RNA polymerase II

6 July 2018

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Identification of a novel element required for processing of intron-encoded box C/D small nucleolar RNAs in Saccharomyces cerevisiae

6 July 2018

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The WD-repeat protein pfs2p bridges two essential factors within the yeast pre-mRNA 3'-end-processing complex

6 July 2018

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Yeast exosome mutants accumulate 3'-extended polyadenylated forms of U4 small nuclear RNA and small nucleolar RNAs

6 July 2018

1 reference

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Functions of the exosome in rRNA, snoRNA and snRNA synthesis

6 July 2018

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A generic protein purification method for protein complex characterization and proteome exploration

6 July 2018

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Nucleolar factors direct the 2'-O-ribose methylation and pseudouridylation of U6 spliceosomal RNA

6 July 2018

1 reference

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Guided tours: from precursor snoRNA to functional snoRNP.

6 July 2018

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Formation of mRNA 3' ends in eukaryotes: mechanism, regulation, and interrelationships with other steps in mRNA synthesis

6 July 2018

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Genomic detection of new yeast pre-mRNA 3'-end-processing signals

6 July 2018

1 reference

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Control of cleavage site selection during mRNA 3' end formation by a yeast hnRNP.

6 July 2018

1 reference

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Modification of U6 spliceosomal RNA is guided by other small RNAs

6 July 2018

1 reference

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Yeast RNase III as a key processing enzyme in small nucleolar RNAs metabolism.

6 July 2018

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The putative nucleic acid helicase Sen1p is required for formation and stability of termini and for maximal rates of synthesis and levels of accumulation of small nucleolar RNAs in Saccharomyces cerevisiae

6 July 2018

1 reference

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Intronic snoRNA biosynthesis in Saccharomyces cerevisiae depends on the lariat-debranching enzyme: intron length effects and activity of a precursor snoRNA

6 July 2018

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Depletion of yeast RNase III blocks correct U2 3' end formation and results in polyadenylated but functional U2 snRNA.

6 July 2018

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Processing of a dicistronic small nucleolar RNA precursor by the RNA endonuclease Rnt1.

6 July 2018

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Control of pre-mRNA accumulation by the essential yeast protein Nrd1 requires high-affinity transcript binding and a domain implicated in RNA polymerase II association

6 July 2018

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Processing of the intron-encoded U18 small nucleolar RNA in the yeast Saccharomyces cerevisiae relies on both exo- and endonucleolytic activities

6 July 2018

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Processing of the precursors to small nucleolar RNAs and rRNAs requires common components

6 July 2018

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Polyadenylation of telomerase RNA in budding yeast

6 July 2018

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Alternative 3'-end processing of U5 snRNA by RNase III.

6 July 2018

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Hrp1, a sequence-specific RNA-binding protein that shuttles between the nucleus and the cytoplasm, is required for mRNA 3'-end formation in yeast

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=134709

The major yeast poly(A)-binding protein is associated with cleavage factor IA and functions in premessenger RNA 3'-end formation

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=134709

Yeast Pab1 interacts with Rna15 and participates in the control of the poly(A) tail length in vitro

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=134709

Sno storm in the nucleolus: new roles for myriad small RNPs

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=134709

Small nucleolar RNAs direct site-specific synthesis of pseudouridine in ribosomal RNA

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=134709

Pre-mRNA processing and the CTD of RNA polymerase II: the tail that wags the dog?

6 July 2018

1 reference

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Function and synthesis of small nucleolar RNAs

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=134709

The family of box ACA small nucleolar RNAs is defined by an evolutionarily conserved secondary structure and ubiquitous sequence elements essential for RNA accumulation

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=134709

3'-end-forming signals of yeast mRNA.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=134709

Association of the yeast poly(A) tail binding protein with translation initiation factor eIF-4G

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=134709

Repression of gene expression by an exogenous sequence element acting in concert with a heterogeneous nuclear ribonucleoprotein-like protein, Nrd1, and the putative helicase Sen1

6 July 2018

1 reference

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The RNA world of the nucleolus: two major families of small RNAs defined by different box elements with related functions

6 July 2018

1 reference

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Novel intron-encoded small nucleolar RNAs with long sequence complementarities to mature rRNAs involved in ribosome biogenesis

6 July 2018

1 reference

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Role of polyadenylation in nucleocytoplasmic transport of mRNA

6 July 2018

1 reference

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Regulatable promoters of Saccharomyces cerevisiae: comparison of transcriptional activity and their use for heterologous expression

6 July 2018

1 reference

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Degradation of mRNA in eukaryotes

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=134709

SLU7 and a novel activity, SSF1, act during the PRP16-dependent step of yeast pre-mRNA splicing.

6 July 2018

1 reference

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6 July 2018

The small nucleolar RNAs

1 reference

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The 5' end of yeast 5.8S rRNA is generated by exonucleases from an upstream cleavage site

6 July 2018

1 reference

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A rapid and simple method for preparation of RNA from Saccharomyces cerevisiae

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=134709

RNA processing in vitro produces mature 3' ends of a variety of Saccharomyces cerevisiae mRNAs

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=134709

Separation of factors required for cleavage and polyadenylation of yeast pre-mRNA

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=134709

RNA14 and RNA15 proteins as components of a yeast pre-mRNA 3'-end processing factor

6 July 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/11839805

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Purification of the Saccharomyces cerevisiae cleavage/polyadenylation factor I. Separation into two components that are required for both cleavage and polyadenylation of mRNA 3' ends

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/11839805

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1128/MCB.22.5.1379-1389.2002

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11839805%20AND%20SRC:MED&resulttype=core&format=json

7 December 2019

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11839805%20AND%20SRC:MED&resulttype=core&format=json

7 December 2019

1 reference