Processing of a dicistronic small nucleolar RNA precursor by the RNA endonuclease Rnt1 (Q28769587)

4 July 2017

title

Processing of a dicistronic small nucleolar RNA precursor by the RNA endonuclease Rnt1 (English)

1 reference

Crossref

https://api.crossref.org/works/10.1093/EMBOJ/17.13.3726

Saccharomyces cerevisiae proteins

29 December 2024

main subject

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A9649442

29 December 2024

RNA precursors

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A9649442

29 December 2024

fungal RNA

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A9649442

post-transcriptional modification

29 December 2024

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A9649442

29 December 2024

4

A. Jacquier

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A9649442

29 December 2024

author name string

G. Chanfreau

series ordinal

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A9649442

29 December 2024

G. Rotondo

2

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29 December 2024

P. Legrain

series ordinal

3

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A9649442

29 December 2024

publication date

1 July 1998

1 reference

https://europepmc.org/articles/pmc1170708?pdf=render

4 July 2017

language of work or name

English

0 references

work available at URL

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A9649442

https://europepmc.org/articles/PMC1170708

29 December 2024

file format

HyperText Markup Language

online access status

open access

content deliverer

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A9649442

https://europepmc.org/articles/PMC1170708?pdf=render

29 December 2024

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A9649442

https://doi.org/10.1093/emboj/17.13.3726

29 December 2024

online access status

open access

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A9649442

https://api.wiley.com/onlinelibrary/tdm/v1/articles/10.1093%2Femboj%2F17.13.3726

29 December 2024

1 reference

Crossref

https://api.crossref.org/works/10.1093/EMBOJ/17.13.3726

https://onlinelibrary.wiley.com/doi/full/10.1093/emboj/17.13.3726

29 December 2024

1 reference

Crossref

https://api.crossref.org/works/10.1093/EMBOJ/17.13.3726

29 December 2024

1 reference

4 July 2017

volume

17

1 reference

4 July 2017

issue

13

1 reference

4 July 2017

page(s)

3726-3737

1 reference

Processing of the precursors to small nucleolar RNAs and rRNAs requires common components

4 July 2017

cites work

1 reference

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Alternative 3′-end processing of U5 snRNA by RNase III

16 March 2017

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Site-specific pseudouridine formation in preribosomal RNA is guided by small nucleolar RNAs

16 March 2017

1 reference

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The yeast La protein is required for the 3' endonucleolytic cleavage that matures tRNA precursors

16 March 2017

1 reference

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The family of box ACA small nucleolar RNAs is defined by an evolutionarily conserved secondary structure and ubiquitous sequence elements essential for RNA accumulation

16 March 2017

1 reference

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A small nucleolar RNA requirement for site-specific ribose methylation of rRNA in Xenopus

16 March 2017

1 reference

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Targeted ribose methylation of RNA in vivo directed by tailored antisense RNA guides

16 March 2017

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Site-specific ribose methylation of preribosomal RNA: a novel function for small nucleolar RNAs

16 March 2017

1 reference

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An essential domain in Saccharomyces cerevisiae U14 snoRNA is absent in vertebrates, but conserved in other yeasts

16 March 2017

1 reference

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A mammalian gene with introns instead of exons generating stable RNA products

16 March 2017

1 reference

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A simple and efficient method for direct gene deletion in Saccharomyces cerevisiae

16 March 2017

1 reference

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A novel small nucleolar RNA (U16) is encoded inside a ribosomal protein intron and originates by processing of the pre-mRNA

16 March 2017

1 reference

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A small nucleolar RNA is processed from an intron of the human gene encoding ribosomal protein S3

16 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1170708

Antisense snoRNAs: a family of nucleolar RNAs with long complementarities to rRNA

16 March 2017

1 reference

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Two different snoRNAs are encoded in introns of amphibian and human L1 ribosomal protein genes

16 March 2017

1 reference

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Sno storm in the nucleolus: new roles for myriad small RNPs

16 March 2017

1 reference

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The RNA world of the nucleolus: two major families of small RNAs defined by different box elements with related functions

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1170708

RNase III cleaves eukaryotic preribosomal RNA at a U3 snoRNP-dependent site

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1170708

7 April 2017

The small nucleolar RNAs

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1170708

Small nucleolar RNAs direct site-specific synthesis of pseudouridine in ribosomal RNA

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1170708

Function and synthesis of small nucleolar RNAs

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1170708

Depletion of U14 small nuclear RNA (snR128) disrupts production of 18S rRNA in Saccharomyces cerevisiae

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1170708

Depletion of yeast RNase III blocks correct U2 3' end formation and results in polyadenylated but functional U2 snRNA

7 April 2017

1 reference

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Regulation of ribonuclease III processing by double-helical sequence antideterminants

3 June 2018

1 reference

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Lithium toxicity in yeast is due to the inhibition of RNA processing enzymes

3 June 2018

1 reference

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Clusters of multiple different small nucleolar RNA genes in plants are expressed as and processed from polycistronic pre-snoRNAs

3 June 2018

1 reference

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Construction of a yeast strain deleted for the TRP1 promoter and coding region that enhances the efficiency of the polymerase chain reaction-disruption method

3 June 2018

1 reference

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Identification of specific nucleotide sequences and structural elements required for intronic U14 snoRNA processing

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1170708

Trans-acting factors in yeast pre-rRNA and pre-snoRNA processing.

3 June 2018

1 reference

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Small nucleolar RNAs guide ribosomal RNA methylation

3 June 2018

1 reference

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Purification and characterization of the Pac1 ribonuclease of Schizosaccharomyces pombe

3 June 2018

1 reference

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An RNA conformational change between the two chemical steps of group II self-splicing.

3 June 2018

1 reference

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Processing of the intron-encoded U16 and U18 snoRNAs: the conserved C and D boxes control both the processing reaction and the stability of the mature snoRNA

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1170708

Elements essential for processing intronic U14 snoRNA are located at the termini of the mature snoRNA sequence and include conserved nucleotide boxes C and D.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1170708

Small nucleolar RNAs encoded by introns of the human cell cycle regulatory gene RCC1.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1170708

Molecular characterisation of plant U14 small nucleolar RNA genes: closely linked genes are transcribed as polycistronic U14 transcripts

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1170708

U14 base-pairs with 18S rRNA: a novel snoRNA interaction required for rRNA processing

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1170708

In vitro study of processing of the intron-encoded U16 small nucleolar RNA in Xenopus laevis

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1170708

Pre-mRNA splicing by complementation with purified human U1, U2, U4/U6 and U5 snRNPs

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1170708

Mutations in conserved intron sequences affect multiple steps in the yeast splicing pathway, particularly assembly of the spliceosome.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1170708

Characterization of an SNR gene locus in Saccharomyces cerevisiae that specifies both dispensible and essential small nuclear RNAs

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1170708

In vitro RNA synthesis with SP6 RNA polymerase

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1170708

Genetic analysis of the rnc operon of Escherichia coli

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1170708

Mouse U14 snRNA is encoded in an intron of the mouse cognate hsc70 heat shock gene

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1170708

Accumulation of U14 small nuclear RNA in Saccharomyces cerevisiae requires box C, box D, and a 5', 3' terminal stem

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1170708

Mouse U14 snRNA is a processed intron of the cognate hsc70 heat shock pre-messenger RNA

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1170708

Mutational analysis of a ribonuclease III processing signal

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1170708

Processing of U14 small nucleolar RNA from three different introns of the mouse 70-kDa-cognate-heat-shock-protein pre-messenger RNA.

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1170708

A novel role for a U5 snRNP protein in 3' splice site selection.

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1170708

Saccharomyces cerevisiae U14 small nuclear RNA has little secondary structure and appears to be produced by post-transcriptional processing

26 November 2018

1 reference

12 December 2020

Prediction of RNA secondary structure by energy minimization

1 reference

12 December 2020

Exonucleolytic processing of small nucleolar RNAs from pre-mRNA introns

1 reference

12 December 2020

U14 small nucleolar RNA makes multiple contacts with the pre-ribosomal RNA

1 reference

12 December 2020

Identifiers

1 reference

National Center for Biotechnology Information

4 July 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/esummary.fcgi?db=pubmed&retmode=json&id=9649442

29 December 2024

1 reference