Diversity, abundance and expression of nitrite reductase (nirK)-like genes in marine thaumarchaea (Q34272003)

1 August 2017

Diversity, abundance and expression of nitrite reductase (nirK)-like genes in marine thaumarchaea (English)

1 reference

1 August 2017

Marie B Lund

1

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Christopher A Francis

object named as

Christopher A Francis

series ordinal

3

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author name string

Jason M Smith

series ordinal

2

1 reference

1 August 2017

17 May 2012

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1 August 2017

1 reference

1 August 2017

6

1 reference

1 August 2017

10

1 reference

1 August 2017

1966-1977

1 reference

https://scigraph.springernature.com/pub.10.1038/ismej.2012.40

1 August 2017

0 references

cites work

Community structure and function of planktonic Crenarchaeota: changes with depth in the South China Sea.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3446794

Genome of a low-salinity ammonia-oxidizing archaeon determined by single-cell and metagenomic analysis

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3446794

Ammonium availability affects the ratio of ammonia-oxidizing bacteria to ammonia-oxidizing archaea in simulated creek ecosystems

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3446794

Contribution of crenarchaeal autotrophic ammonia oxidizers to the dark primary production in Tyrrhenian deep waters (Central Mediterranean Sea)

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3446794

Metatranscriptomic analysis of ammonia-oxidizing organisms in an estuarine bacterioplankton assemblage.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3446794

Community cyberinfrastructure for Advanced Microbial Ecology Research and Analysis: the CAMERA resource

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3446794

Relevance of a crenarchaeotal subcluster related to Candidatus Nitrosopumilus maritimus to ammonia oxidation in the suboxic zone of the central Baltic Sea.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3446794

Nitrosopumilus maritimus genome reveals unique mechanisms for nitrification and autotrophy in globally distributed marine crenarchaea

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3446794

Homologues of nitrite reductases in ammonia-oxidizing archaea: diversity and genomic context

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3446794

Abundances of crenarchaeal amoA genes and transcripts in the Pacific Ocean

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3446794

Introducing mothur: open-source, platform-independent, community-supported software for describing and comparing microbial communities

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3446794

Relative abundance and diversity of ammonia-oxidizing archaea and bacteria in the San Francisco Bay estuary

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3446794

The influence of soil pH on the diversity, abundance and transcriptional activity of ammonia oxidizing archaea and bacteria

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3446794

Genomic patterns of recombination, clonal divergence and environment in marine microbial populations

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3446794

Nitric oxide: interaction with the ammonia monooxygenase and regulation of metabolic activities in ammonia oxidizers

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3446794

SILVA: a comprehensive online resource for quality checked and aligned ribosomal RNA sequence data compatible with ARB

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3446794

Quantitative distribution of presumptive archaeal and bacterial nitrifiers in Monterey Bay and the North Pacific Subtropical Gyre

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3446794

Linking crenarchaeal and bacterial nitrification to anammox in the Black Sea

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3446794

The Sorcerer II Global Ocean Sampling expedition: expanding the universe of protein families

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3446794

Genomic analysis of the uncultivated marine crenarchaeote Cenarchaeum symbiosum

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3446794

Role of nitrogen oxides in the metabolism of ammonia-oxidizing bacteria

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3446794

Novel genes for nitrite reductase and Amo-related proteins indicate a role of uncultivated mesophilic crenarchaeota in nitrogen cycling

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3446794

Ubiquity and diversity of ammonia-oxidizing archaea in water columns and sediments of the ocean.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3446794

Environmental genome shotgun sequencing of the Sargasso Sea

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3446794

ARB: a software environment for sequence data

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3446794

A Simple, Fast, and Accurate Algorithm to Estimate Large Phylogenies by Maximum Likelihood

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3446794

Nitrite reductase of Nitrosomonas europaea is not essential for production of gaseous nitrogen oxides and confers tolerance to nitrite

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3446794

Dissimilatory nitrite reductase genes from autotrophic ammonia-oxidizing bacteria.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3446794

Molecular and biogeochemical evidence for ammonia oxidation by marine Crenarchaeota in the Gulf of California.

6 July 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2012.40

Role of nitrite reductase in the ammonia-oxidizing pathway of Nitrosomonas europaea

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2012.40

Molecular diversity of nitrite reductase genes (nirK) in nitrifying bacteria.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2012.40

Ammonia-oxidizing bacteria and archaea grow under contrasting soil nitrogen conditions

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2012.40

A large source of atmospheric nitrous oxide from subtropical North Pacific surface waters

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2012.40

Phylogeny of nitrite reductase (nirK) and nitric oxide reductase (norB) genes from Nitrosospira species isolated from soil.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2012.40

Ammonia oxidation kinetics determine niche separation of nitrifying Archaea and Bacteria

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2012.40

Isotopic signature of N(2)O produced by marine ammonia-oxidizing archaea

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2012.40

Activity, abundance and diversity of nitrifying archaea and bacteria in the central California Current

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2012.40

Anaerobic ammonia oxidation with nitrogen dioxide by Nitrosomonas eutropha.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2012.40

Denitrification and ammonia oxidation by Nitrosomonas europaea wild-type, and NirK- and NorB-deficient mutants.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2012.40

Nitrosospira spp. can produce nitrous oxide via a nitrifier denitrification pathway.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2012.40

High rate of aerobic nitrification and denitrification by Nitrosomonas eutropha grown in a fermentor with complete biomass retention in the presence of gaseous NO2 or NO.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2012.40

Significance of gaseous NO for ammonia oxidation by Nitrosomonas eutropha

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22592819

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Ammonia oxidation by Nitrosomonas eutropha with NO(2) as oxidant is not inhibited by acetylene

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22592819

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Denitrifier abundance and activity across the San Francisco Bay estuary

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22592819

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1038/ISMEJ.2012.40

1 reference

PubMed ID

22592819

Dimensions Publication ID

1 August 2017

0 references

1 reference

1 August 2017

1 reference

PubMed ID

22592819