A metagenomic assessment of winter and summer bacterioplankton from Antarctica Peninsula coastal surface waters (Q34245980)

31 July 2017

A metagenomic assessment of winter and summer bacterioplankton from Antarctica Peninsula coastal surface waters (English)

1 reference

31 July 2017

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Ricardo Cavicchioli

7

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author name string

Joseph J Grzymski

1

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31 July 2017

Christian S Riesenfeld

2

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31 July 2017

Timothy J Williams

3

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31 July 2017

Alex M Dussaq

4

1 reference

31 July 2017

Hugh Ducklow

5

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31 July 2017

Matthew Erickson

6

1 reference

31 July 2017

Alison E Murray

8

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31 July 2017

26 April 2012

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31 July 2017

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31 July 2017

6

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31 July 2017

1901-1915

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31 July 2017

10

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https://scigraph.springernature.com/pub.10.1038/ismej.2012.31

31 July 2017

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cites work

A metaproteomic assessment of winter and summer bacterioplankton from Antarctic Peninsula coastal surface waters.

1 reference

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Pronounced summer to winter differences and higher wintertime richness in coastal Antarctic marine bacterioplankton

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3446801

Potential for chemolithoautotrophy among ubiquitous bacteria lineages in the dark ocean.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3446801

Defining seasonal marine microbial community dynamics

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3446801

Nitrosopumilus maritimus genome reveals unique mechanisms for nitrification and autotrophy in globally distributed marine crenarchaea

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3446801

Identifying biologically relevant differences between metagenomic communities

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3446801

The GAAS metagenomic tool and its estimations of viral and microbial average genome size in four major biomes

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3446801

The genomic basis of trophic strategy in marine bacteria

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3446801

Introducing mothur: open-source, platform-independent, community-supported software for describing and comparing microbial communities

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3446801

Major role of microbes in carbon fluxes during Austral winter in the Southern Drake Passage

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3446801

The seasonal structure of microbial communities in the Western English Channel

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3446801

Circos: an information aesthetic for comparative genomics

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3446801

Photoheterotrophic microbes in the Arctic Ocean in summer and winter

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3446801

Recent changes in phytoplankton communities associated with rapid regional climate change along the western Antarctic Peninsula

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3446801

Seasonal dynamics of SAR11 populations in the euphotic and mesopelagic zones of the northwestern Sargasso Sea.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3446801

Metagenome analysis of an extreme microbial symbiosis reveals eurythermal adaptation and metabolic flexibility

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3446801

Bacterial diversity in the oxygen minimum zone of the eastern tropical South Pacific

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3446801

The integrated microbial genomes (IMG) system in 2007: data content and analysis tool extensions

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3446801

Clustal W and Clustal X version 2.0

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3446801

Diversity and genomics of Antarctic marine micro-organisms

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3446801

Ecological genomics of marine Roseobacters

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3446801

MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) Software Version 4.0

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3446801

Quantitative distribution of presumptive archaeal and bacterial nitrifiers in Monterey Bay and the North Pacific Subtropical Gyre

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3446801

The Sorcerer II Global Ocean Sampling expedition: northwest Atlantic through eastern tropical Pacific

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3446801

MEGAN analysis of metagenomic data

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3446801

Spatial coupling of nitrogen inputs and losses in the ocean

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3446801

Genomic analysis of the uncultivated marine crenarchaeote Cenarchaeum symbiosum

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3446801

New screening software shows that most recent large 16S rRNA gene clone libraries contain chimeras

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3446801

NAST: a multiple sequence alignment server for comparative analysis of 16S rRNA genes

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3446801

Pathways of carbon assimilation and ammonia oxidation suggested by environmental genomic analyses of marine Crenarchaeota

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3446801

Comparative genomics of DNA fragments from six Antarctic marine planktonic bacteria

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3446801

Community genomics among stratified microbial assemblages in the ocean's interior

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3446801

Bacterioplankton secondary production estimates for coastal waters of british columbia, antarctica, and california

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3446801

Ubiquity and diversity of ammonia-oxidizing archaea in water columns and sediments of the ocean.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3446801

Isolation of an autotrophic ammonia-oxidizing marine archaeon

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3446801

Phylogenetic screening of ribosomal RNA gene-containing clones in Bacterial Artificial Chromosome (BAC) libraries from different depths in Monterey Bay.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3446801

Prospects for inferring very large phylogenies by using the neighbor-joining method

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3446801

Two bacteria phylotypes are predominant in the Suiyo seamount hydrothermal plume

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3446801

Cultivation and growth characteristics of a diverse group of oligotrophic marine Gammaproteobacteria

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3446801

Diversity and structure of bacterial communities in Arctic versus Antarctic pack ice.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3446801

Phylogenetic composition of bacterioplankton assemblages from the Arctic Ocean

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3446801

Comparative genomic analysis of archaeal genotypic variants in a single population and in two different oceanic provinces

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3446801

Archaeal dominance in the mesopelagic zone of the Pacific Ocean

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3446801

Poles apart: biodiversity and biogeography of sea ice bacteria

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3446801

Seasonal and spatial variability of bacterial and archaeal assemblages in the coastal waters near Anvers Island, Antarctica

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3446801

Vertical distribution and phylogenetic characterization of marine planktonic Archaea in the Santa Barbara Channel

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3446801

High abundance of Archaea in Antarctic marine picoplankton

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3446801

Novel major archaebacterial group from marine plankton

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3446801

High bicarbonate assimilation in the dark by Arctic bacteria.

6 July 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2012.31

Southern Ocean iron enrichment experiment: carbon cycling in high- and low-Si waters.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2012.31

The seasonal development of the bacterioplankton bloom in the Ross Sea, Antarctica, 1994–1997

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2012.31

Unique archaeal assemblages in the Arctic Ocean unveiled by massively parallel tag sequencing.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2012.31

Contribution of Archaea to total prokaryotic production in the deep Atlantic Ocean.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2012.31

Temperature effects on export production in the open ocean

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2012.31

Crystal structure of a RuBisCO-like protein from the green sulfur bacterium Chlorobium tepidum

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2012.31

Ammonia oxidation kinetics determine niche separation of nitrifying Archaea and Bacteria

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2012.31

Genome sequence of the oligotrophic marine Gammaproteobacterium HTCC2143, isolated from the Oregon Coast.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2012.31

Physical and biological correlates of virus dynamics in the southern Beaufort Sea and Amundsen Gulf

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2012.31

Recent Rapid Regional Climate Warming on the Antarctic Peninsula

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2012.31

Metagenome of a versatile chemolithoautotroph from expanding oceanic dead zones

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2012.31

Defining the response of a microorganism to temperatures that span its complete growth temperature range (-2°C to 28°C) using multiplex quantitative proteomics

21 January 2018

2 references

https://api.crossref.org/works/10.1038%2FISMEJ.2012.31

21 January 2018

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3446801

Trends in Antarctic annual sea ice retreat and advance and their relation to El Niño–Southern Oscillation and Southern Annular Mode variability

28 October 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2012.31

inferred from DOI database lookup

7 January 2021

based on heuristic

Identifiers

DOI

10.1038/ISMEJ.2012.31

1 reference

Dimensions Publication ID

31 July 2017

0 references

1 reference

31 July 2017

1 reference