Systematic dissection and optimization of inducible enhancers in human cells using a massively parallel reporter assay (Q34174445)

31 July 2017

Systematic dissection and optimization of inducible enhancers in human cells using a massively parallel reporter assay (English)

1 reference

31 July 2017

12

Eric S Lander

1 reference

31 July 2017

Tiberiu Tesileanu

4

0 references

Justin B Kinney

object named as

Justin B Kinney

10

0 references

Manolis Kellis

11

object named as

Manolis Kellis

1 reference

31 July 2017

13

Tarjei S Mikkelsen

1 reference

31 July 2017

8

Andreas Gnirke

1 reference

31 July 2017

9

Curtis G Callan

1 reference

31 July 2017

Alexandre Melnikov

1

1 reference

31 July 2017

Anand Murugan

2

1 reference

31 July 2017

Xiaolan Zhang

3

1 reference

31 July 2017

Li Wang

5

1 reference

31 July 2017

Peter Rogov

6

1 reference

31 July 2017

Soheil Feizi

7

1 reference

31 July 2017

language of work or name

English

0 references

publication date

26 February 2012

1 reference

31 July 2017

1 reference

31 July 2017

30

1 reference

31 July 2017

271-277

1 reference

31 July 2017

3

1 reference

https://scigraph.springernature.com/pub.10.1038/nbt.2137

31 July 2017

0 references

cites work

Initial impact of the sequencing of the human genome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3297981

High-fidelity gene synthesis by retrieval of sequence-verified DNA identified using high-throughput pyrosequencing

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3297981

Improved Tet-responsive promoters with minimized background expression

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3297981

The NIH Roadmap Epigenomics Mapping Consortium

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3297981

Using deep sequencing to characterize the biophysical mechanism of a transcriptional regulatory sequence

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3297981

Synthesis of high-quality libraries of long (150mer) oligonucleotides by a novel depurination controlled process

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3297981

Synthetic design of strong promoters

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3297981

High-resolution analysis of DNA regulatory elements by synthetic saturation mutagenesis

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3297981

Targeting cancer by transcriptional control in cancer gene therapy and viral oncolysis

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3297981

An Atomic Model of the Interferon-β Enhanceosome

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3297981

Construction and model-based analysis of a promoter library for E. coli: an indispensable tool for metabolic engineering

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3297981

Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3297981

Bioluminescent assays for high-throughput screening

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3297981

Transcriptional enhancers: Intelligent enhanceosomes or flexible billboards?

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3297981

Transcriptional regulation by the phosphorylation-dependent factor CREB

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3297981

Assembly of a functional beta interferon enhanceosome is dependent on ATF-2-c-jun heterodimer orientation

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3297981

Synthetic promoter elements obtained by nucleotide sequence variation and selection for activity

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3297981

Quantitative sequence-activity models (QSAM)--tools for sequence design

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3297981

Different binding specificities and transactivation of variant CRE's by CREB complexes

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3297981

Quantitative analysis of the relationship between nucleotide sequence and functional activity

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3297981

Excess information at bacteriophage T7 genomic promoters detected by a random cloning technique.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3297981

The CGTCA sequence motif is essential for biological activity of the vasoactive intestinal peptide gene cAMP-regulated enhancer

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3297981

Selection of optimal kappa B/Rel DNA-binding motifs: interaction of both subunits of NF-kappa B with DNA is required for transcriptional activation

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3297981

Parallel on-chip gene synthesis and application to optimization of protein expression.

5 July 2018

1 reference

Crossref

https://api.crossref.org/works/10.1038%2FNBT.2137

Chromatin immunoprecipitation (ChIP).

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1038%2FNBT.2137

inferred from DOI database lookup

7 January 2021

based on heuristic

Identifiers

DOI

10.1038/NBT.2137

1 reference

Dimensions Publication ID

31 July 2017

0 references

1 reference

31 July 2017

1 reference