Assessing the complex sponge microbiota: core, variable and species-specific bacterial communities in marine sponges (Q34047356)

30 July 2017

Assessing the complex sponge microbiota: core, variable and species-specific bacterial communities in marine sponges (English)

1 reference

30 July 2017

Peter Tsai

2

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Michael W. Taylor

Michael W Taylor

13

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Nicole Webster

Nicole Webster

11

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Allen Gerard Rodrigo

Allen Rodrigo

8

0 references

James J. Bell

James Bell

3

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Ute Hentschel

Ute Hentschel

12

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Jean Vacelet

10

Jean Vacelet

1 reference

30 July 2017

4

Jane Fromont

1 reference

30 July 2017

5

Micha Ilan

1 reference

30 July 2017

Susanne Schmitt

1

1 reference

30 July 2017

Niels Lindquist

6

1 reference

30 July 2017

Thierry Perez

7

1 reference

30 July 2017

Peter J Schupp

9

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30 July 2017

language of work or name

1 reference

13 October 2011

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full work available at URL

30 July 2017

https://www.nature.com/articles/ismej2011116.pdf

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published in

The ISME Journal

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30 July 2017

6

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30 July 2017

564-576

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30 July 2017

3

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https://scigraph.springernature.com/pub.10.1038/ismej.2011.116

30 July 2017

0 references

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Deep sequencing reveals exceptional diversity and modes of transmission for bacterial sponge symbionts

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Linking chemical and microbial diversity in marine sponges: possible role for poribacteria as producers of methyl-branched fatty acids.

5 July 2018

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Single-cell genomics reveals the lifestyle of Poribacteria, a candidate phylum symbiotically associated with marine sponges

5 July 2018

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Functional genomic signatures of sponge bacteria reveal unique and shared features of symbiosis

5 July 2018

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5 July 2018

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Bacterial diversity in rhizosphere soil from Antarctic vascular plants of Admiralty Bay, maritime Antarctica

5 July 2018

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5 July 2018

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5 July 2018

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Ecology of the rare microbial biosphere of the Arctic Ocean

5 July 2018

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5 July 2018

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5 July 2018

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5 July 2018

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Wrinkles in the rare biosphere: pyrosequencing errors can lead to artificial inflation of diversity estimates

5 July 2018

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The seasonal structure of microbial communities in the Western English Channel

5 July 2018

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Evidence for vertical transmission of bacterial symbionts from adult to embryo in the Caribbean sponge Svenzea zeai

5 July 2018

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Diversity of aerobic and anaerobic ammonia-oxidizing bacteria in marine sponges

5 July 2018

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Widespread distribution of poribacteria in demospongiae

5 July 2018

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Biological characterisation of Haliclona (?gellius) sp.: sponge and associated microorganisms

5 July 2018

1 reference

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Complex nitrogen cycling in the sponge Geodia barretti

5 July 2018

1 reference

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Microbial community profiling for human microbiome projects: Tools, techniques, and challenges

5 July 2018

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Getting to the core of the gut microbiome

5 July 2018

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Variations in archaeal and bacterial diversity associated with the sulfate-methane transition zone in continental margin sediments (Santa Barbara Basin, California).

5 July 2018

1 reference

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A core gut microbiome in obese and lean twins

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3280146

Molecular microbial diversity survey of sponge reproductive stages and mechanistic insights into vertical transmission of microbial symbionts

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3280146

Phylogenetic analyses of ribosomal DNA-containing bacterioplankton genome fragments from a 4000 m vertical profile in the North Pacific Subtropical Gyre

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3280146

Temperature thresholds for bacterial symbiosis with a sponge

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3280146

Isolation of novel bacteria, including a candidate division, from geothermal soils in New Zealand

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3280146

Microbial population structures in the deep marine biosphere

5 July 2018

1 reference

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Sponge-associated microorganisms: evolution, ecology, and biotechnological potential

5 July 2018

1 reference

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Metagenomic approaches to exploit the biotechnological potential of the microbial consortia of marine sponges.

5 July 2018

1 reference

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Vertical transmission of a phylogenetically complex microbial consortium in the viviparous sponge Ircinia felix

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3280146

Vertical transmission of diverse microbes in the tropical sponge Corticium sp.

5 July 2018

1 reference

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Culture isolation and culture-independent clone libraries reveal new marine Synechococcus ecotypes with distinctive light and N physiologies

5 July 2018

1 reference

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Microbial diversity in the deep sea and the underexplored "rare biosphere"

5 July 2018

1 reference

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Monitoring microbial community composition by fluorescence in situ hybridization during cultivation of the marine cold-water sponge Geodia barretti

5 July 2018

1 reference

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The Planctomycetes, Verrucomicrobia, Chlamydiae and sister phyla comprise a superphylum with biotechnological and medical relevance

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3280146

Characterization of a culturable alphaproteobacterial symbiont common to many marine sponges and evidence for vertical transmission via sponge larvae

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3280146

JColorGrid: software for the visualization of biological measurements

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3280146

Marine sponges as microbial fermenters

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3280146

Microbial diversity of marine sponges.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3280146

Discovery of the novel candidate phylum "Poribacteria" in marine sponges

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3280146

Host specificity in marine sponge-associated bacteria, and potential implications for marine microbial diversity

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3280146

Genome divergence in two Prochlorococcus ecotypes reflects oceanic niche differentiation

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3280146

SAR11 clade dominates ocean surface bacterioplankton communities.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3280146

Molecular evidence for a uniform microbial community in sponges from different oceans

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3280146

Novel division level bacterial diversity in a Yellowstone hot spring

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3280146

Basic local alignment search tool

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3280146

Pyrosequencing reveals contrasting seasonal dynamics of taxa within Baltic Sea bacterioplankton communities

5 July 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2011.116

Physiology, phylogeny and in situ evidence for bacterial and archaeal nitrifiers in the marine sponge Aplysina aerophoba.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2011.116

Oceanographic Basis of the Global Surface Distribution of Prochlorococcus Ecotypes

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2011.116

DNA sequence quality trimming and vector removal.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2011.116

Unique archaeal assemblages in the Arctic Ocean unveiled by massively parallel tag sequencing.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2011.116

Biogeography of the ubiquitous marine bacterium Alteromonas macleodii determined by multilocus sequence analysis.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2011.116

Comparative genomics of two ecotypes of the marine planktonic copiotroph Alteromonas macleodii suggests alternative lifestyles associated with different kinds of particulate organic matter

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2011.116

The 'rare biosphere': a reality check

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2011.116

Metagenomic analysis of stressed coral holobionts.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2011.116

Electron microscope study of the association between some sponges and bacteria

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2011.116

Specificity of bacterial symbionts in Mediterranean and Great Barrier Reef sponges.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2011.116

An Anaerobic World in Sponges

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2011.116

Linking abundance and diversity of sponge-associated microbial communities to metabolic differences in host sponges

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2011.116

Deep sequencing reveals diversity and community structure of complex microbiota in five Mediterranean sponges

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2011.116

inferred from DOI database lookup

7 January 2021

based on heuristic

Identifiers

DOI

10.1038/ISMEJ.2011.116

1 reference

Dimensions Publication ID

30 July 2017

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1 reference

30 July 2017

1 reference