Essential Genes in the Core Genome of the Human Pathogen Streptococcus pyogenes (Q34044076)

30 July 2017

Essential Genes in the Core Genome of the Human Pathogen Streptococcus pyogenes (English)

1 reference

30 July 2017

Streptococcus pyogenes

object named as

Streptococcus pyogenes

1 reference

Kevin S McIver

9

0 references

Najib El-sayed

object named as

Najib M El-Sayed

8

0 references

author name string

Yoann Le Breton

1

1 reference

30 July 2017

Ashton T Belew

2

1 reference

30 July 2017

Kayla M Valdes

3

1 reference

30 July 2017

Emrul Islam

4

1 reference

30 July 2017

Patrick Curry

5

1 reference

30 July 2017

Hervé Tettelin

6

1 reference

30 July 2017

Mark E Shirtliff

7

1 reference

30 July 2017

language of work or name

English

0 references

publication date

21 May 2015

1 reference

30 July 2017

1 reference

30 July 2017

5

1 reference

30 July 2017

9838

1 reference

Creative Commons Attribution 4.0 International

30 July 2017

start time

21 May 2015

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

exact match

https://scigraph.springernature.com/pub.10.1038/srep09838

0 references

cites work

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Transcriptional landscape and essential genes of Neisseria gonorrhoeae

5 July 2018

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A systematic and functional classification of Streptococcus pyogenes that serves as a new tool for molecular typing and vaccine development

5 July 2018

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Disease manifestations and pathogenic mechanisms of Group A Streptococcus

5 July 2018

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Genome-wide saturation mutagenesis of Burkholderia pseudomallei K96243 predicts essential genes and novel targets for antimicrobial development

5 July 2018

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5 July 2018

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Laboratory growth and maintenance of Streptococcus pyogenes (the Group A Streptococcus, GAS).

5 July 2018

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A Hidden Markov Model for identifying essential and growth-defect regions in bacterial genomes from transposon insertion sequencing data

5 July 2018

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High-resolution definition of the Vibrio cholerae essential gene set with hidden Markov model-based analyses of transposon-insertion sequencing data

5 July 2018

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5 July 2018

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Platforms for antibiotic discovery

5 July 2018

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Bayesian analysis of gene essentiality based on sequencing of transposon insertion libraries.

5 July 2018

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Genome-wide identification of genes required for fitness of group A Streptococcus in human blood

5 July 2018

1 reference

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Tracing the evolutionary history of the pandemic group A streptococcal M1T1 clone

5 July 2018

1 reference

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Invasive group a streptococcal disease: epidemiology, pathogenesis and management.

5 July 2018

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Integrative Genomics Viewer (IGV): high-performance genomics data visualization and exploration

5 July 2018

1 reference

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Genome scanning for conditionally essential genes in Salmonella enterica Serotype Typhimurium

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4440532

Genome-wide essential gene identification in Streptococcus sanguinis

5 July 2018

1 reference

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NGS QC Toolkit: a toolkit for quality control of next generation sequencing data

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4440532

High-resolution phenotypic profiling defines genes essential for mycobacterial growth and cholesterol catabolism

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4440532

Molecular insight into invasive group A streptococcal disease

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4440532

The essential genome of a bacterium

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4440532

Improving pan-genome annotation using whole genome multiple alignment

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4440532

The histone-like protein Hlp is essential for growth of Streptococcus pyogenes: comparison of genetic approaches to study essential genes

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4440532

Genome-scale identification of resistance functions in Pseudomonas aeruginosa using Tn-seq

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4440532

Integrative genomics viewer

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4440532

Mugsy: fast multiple alignment of closely related whole genomes

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4440532

Differential expression analysis for sequence count data

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4440532

Synthetic riboswitches that induce gene expression in diverse bacterial species

5 July 2018

1 reference

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Genetic switch to hypervirulence reduces colonization phenotypes of the globally disseminated group A streptococcus M1T1 clone

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4440532

CcpA and LacD.1 affect temporal regulation of Streptococcus pyogenes virulence genes

5 July 2018

1 reference

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Simultaneous assay of every Salmonella Typhi gene using one million transposon mutants

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4440532

Tracking insertion mutants within libraries by deep sequencing and a genome-wide screen for Haemophilus genes required in the lung

5 July 2018

1 reference

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Tn-seq: high-throughput parallel sequencing for fitness and genetic interaction studies in microorganisms

5 July 2018

1 reference

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Identifying genetic determinants needed to establish a human gut symbiont in its habitat

5 July 2018

1 reference

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Molecular pathogenesis of necrotizing fasciitis

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4440532

The Sequence Alignment/Map format and SAMtools

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4440532

Population biology of the human restricted pathogen, Streptococcus pyogenes

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4440532

CovS simultaneously activates and inhibits the CovR-mediated repression of distinct subsets of group A Streptococcus virulence factor-encoding genes

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4440532

Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4440532

First Streptococcus pyogenes signature-tagged mutagenesis screen identifies novel virulence determinants

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4440532

Comparative genomics: the bacterial pan-genome

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4440532

A matter of life and death: cell wall homeostasis and the WalKR (YycGF) essential signal transduction pathway

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4440532

Genome sequence of a nephritogenic and highly transformable M49 strain of Streptococcus pyogenes

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4440532

The role of complex carbohydrate catabolism in the pathogenesis of invasive streptococci

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4440532

Pathogenesis of group A streptococcal infections and their sequelae

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4440532

Systematic review of factors contributing to penicillin treatment failure in Streptococcus pyogenes pharyngitis

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4440532

The catabolite control protein CcpA binds to Pmga and influences expression of the virulence regulator Mga in the Group A streptococcus

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4440532

New insights into the WalK/WalR (YycG/YycF) essential signal transduction pathway reveal a major role in controlling cell wall metabolism and biofilm formation in Staphylococcus aureus

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4440532

New understanding of the group A Streptococcus pathogenesis cycle

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4440532

Development of genomic array footprinting for identification of conditionally essential genes in Streptococcus pneumoniae

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4440532

A comprehensive transposon mutant library of Francisella novicida, a bioweapon surrogate

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4440532

Construction of Escherichia coli K-12 in-frame, single-gene knockout mutants: the Keio collection

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4440532

Defects in ex vivo and in vivo growth and sensitivity to osmotic stress of group A Streptococcus caused by interruption of response regulator gene vicR.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4440532

Essential genes of a minimal bacterium

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4440532

The global burden of group A streptococcal diseases

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4440532

Evolutionary Origin and Emergence of a Highly Successful Clone of Serotype M1 Group A Streptococcus Involved Multiple Horizontal Gene Transfer Events

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4440532

Mosaic prophages with horizontally acquired genes account for the emergence and diversification of the globally disseminated M1T1 clone of Streptococcus pyogenes.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4440532

Determination of the core of a minimal bacterial gene set

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4440532

CovS inactivates CovR and is required for growth under conditions of general stress in Streptococcus pyogenes

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4440532

A postgenomic method for predicting essential genes at subsaturation levels of mutagenesis: application to Mycobacterium tuberculosis

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4440532

Essential Bacillus subtilis genes

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4440532

A genome-wide strategy for the identification of essential genes in Staphylococcus aureus

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4440532

Comprehensive identification of conditionally essential genes in mycobacteria

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4440532

TnAraOut, a transposon-based approach to identify and characterize essential bacterial genes

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4440532

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4440532

Global transposon mutagenesis and a minimal Mycoplasma genome

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4440532

Group A beta-hemolytic streptococcal infections

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4440532

Systematic identification of essential genes by in vitro mariner mutagenesis

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4440532

Over-production of proteins in Escherichia coli: mutant hosts that allow synthesis of some membrane proteins and globular proteins at high levels

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4440532

Electrotransformation of Streptococcus pyogenes with plasmid and linear DNA.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4440532

Unexplained reduced microbiological efficacy of intramuscular benzathine penicillin G and of oral penicillin V in eradication of group a streptococci from children with acute pharyngitis

5 July 2018

1 reference

Whole-genome detection of conditionally essential and dispensable genes in Escherichia coli via genetic footprinting.

21 January 2018

1 reference

Molecular characterization of Enterococcus faecalis two-component signal transduction pathways related to environmental stresses.

21 January 2018

1 reference

Progress toward a global group a streptococcal vaccine.

21 January 2018

1 reference

Linking the nutritional status of Streptococcus pyogenes to alteration of transcriptional gene expression: the action of CodY and RelA.

21 January 2018

1 reference

Analysis of the role of CovR and CovS in the dissemination of Streptococcus pyogenes in invasive skin disease

21 January 2018

1 reference

12 December 2020

Comparative approach to analysis of gene essentiality

1 reference

12 December 2020

Are essential genes really essential?

1 reference

12 December 2020

Genome-Wide Fitness and Genetic Interactions Determined by Tn-seq, a High-Throughput Massively Parallel Sequencing Method for Microorganisms

1 reference

12 December 2020

24 Plasmid screening at high colony density

1 reference

12 December 2020

Overview of whole-genome essentiality analysis

1 reference

7 January 2021

inferred from DOI database lookup

Identifiers

DOI

10.1038/SREP09838

1 reference

Dimensions Publication ID

30 July 2017

0 references

1 reference

30 July 2017

1 reference