Highly parallel genomic assays (Q33997732)

30 July 2017

title

Highly parallel genomic assays (English)

1 reference

30 July 2017

Jian-Bing Fan

1

1 reference

30 July 2017

Mark S Chee

series ordinal

2

1 reference

30 July 2017

Kevin L Gunderson

series ordinal

3

1 reference

30 July 2017

publication date

1 August 2006

1 reference

30 July 2017

language of work or name

English

0 references

published in

Nature Reviews Genetics

1 reference

30 July 2017

volume

7

1 reference

30 July 2017

issue

8

1 reference

30 July 2017

page(s)

632-644

1 reference

publication type of scholarly work

30 July 2017

review article

1 reference

Molecular classification of cancer: class discovery and class prediction by gene expression monitoring

cites work

1 reference

Gene expression profiling predicts clinical outcome of breast cancer

31 March 2020

1 reference

A molecular signature of metastasis in primary solid tumors

31 March 2020

1 reference

Evaluation of genomic changes in a large series of malignant ovarian germ cell tumors--relation to clinicopathologic variables

31 March 2020

1 reference

Defining molecular profiles of poor outcome in patients with invasive bladder cancer using oligonucleotide microarrays

31 March 2020

1 reference

Analyzing and comparing nucleic acid sequences by hybridization to arrays of oligonucleotides: evaluation using experimental models

31 March 2020

1 reference

Light-generated oligonucleotide arrays for rapid DNA sequence analysis

31 March 2020

1 reference

Quantitative monitoring of gene expression patterns with a complementary DNA microarray

31 March 2020

1 reference

Expression monitoring by hybridization to high-density oligonucleotide arrays

31 March 2020

1 reference

Toward genome-wide SNP genotyping

31 March 2020

1 reference

Advanced sequencing technologies: methods and goals

31 March 2020

1 reference

The complex interplay among factors that influence allelic association.

31 March 2020

1 reference

Genome-wide association studies for common diseases and complex traits

31 March 2020

1 reference

Applications of DNA tiling arrays for whole-genome analysis

31 March 2020

1 reference

Amplified RNA synthesized from limited quantities of heterogeneous cDNA.

31 March 2020

1 reference

Antisense RNA Amplification: A Linear Amplification Method for Analyzing the mRNA Population from Single Living Cells

31 March 2020

1 reference

Padlock Probes: Circularizing Oligonucleotides for Localized DNA Detection

31 March 2020

1 reference

Detecting Genes with Ligases

31 March 2020

1 reference

Signal amplification of padlock probes by rolling circle replication

31 March 2020

1 reference

L-RCA (ligation-rolling circle amplification): a general method for genotyping of single nucleotide polymorphisms (SNPs)

31 March 2020

1 reference

High-throughput genotyping of single nucleotide polymorphisms with rolling circle amplification

31 March 2020

1 reference

Selection of primers for polymerase chain reaction

31 March 2020

1 reference

Multiplex PCR design strategy used for the simultaneous amplification of 10 Y chromosome short tandem repeat (STR) loci

31 March 2020

1 reference

AutoDimer: a screening tool for primer-dimer and hairpin structures

31 March 2020

1 reference

Multiplex genotype determination at a large number of gene loci

31 March 2020

1 reference

The elimination of primer-dimer accumulation in PCR

31 March 2020

1 reference

Accessing genetic information with high-density DNA arrays

31 March 2020

1 reference

Large-scale identification, mapping, and genotyping of single-nucleotide polymorphisms in the human genome

31 March 2020

1 reference

Parallel genotyping of human SNPs using generic high-density oligonucleotide tag arrays

31 March 2020

1 reference

Solid phase DNA amplification: characterisation of primer attachment and amplification mechanisms

31 March 2020

1 reference

SNP Genotyping by Multiplexed Solid-Phase Amplification and Fluorescent Minisequencing

31 March 2020

1 reference

Use of immobilized PCR primers to generate covalently immobilized DNAs for in vitro transcription/translation reactions

31 March 2020

1 reference

A genotyping system capable of simultaneously analyzing >1000 single nucleotide polymorphisms in a haploid genome

31 March 2020

1 reference

Multiplexed genotyping with sequence-tagged molecular inversion probes

31 March 2020

1 reference

Highly parallel SNP genotyping

31 March 2020

1 reference

A haplotype map of the human genome

31 March 2020

1 reference

Highly multiplexed molecular inversion probe genotyping: over 10,000 targeted SNPs genotyped in a single tube assay

31 March 2020

1 reference

Whole-genome patterns of common DNA variation in three human populations

31 March 2020

1 reference

Blocks of limited haplotype diversity revealed by high-resolution scanning of human chromosome 21.

31 March 2020

1 reference

Whole genome PCR: application to the identification of sequences bound by gene regulatory proteins

31 March 2020

1 reference

Cloning the differences between two complex genomes

31 March 2020

1 reference

Genetic analysis using genomic representations

31 March 2020

1 reference

Representational oligonucleotide microarray analysis: a high-resolution method to detect genome copy number variation

31 March 2020

1 reference

Large-scale copy number polymorphism in the human genome

31 March 2020

1 reference

Large-scale genotyping of complex DNA.

31 March 2020

1 reference

Parallel genotyping of over 10,000 SNPs using a one-primer assay on a high-density oligonucleotide array

31 March 2020

1 reference

Genotyping over 100,000 SNPs on a pair of oligonucleotide arrays.

31 March 2020

1 reference

A common genetic variant is associated with adult and childhood obesity

31 March 2020

1 reference

Complement factor H polymorphism in age-related macular degeneration

31 March 2020

1 reference

A genome-wide scalable SNP genotyping assay using microarray technology

31 March 2020

1 reference

Whole-genome genotyping with the single-base extension assay

31 March 2020

1 reference

31 March 2020

Rubicon Genomics, Inc.

1 reference

Comprehensive human genome amplification using multiple displacement amplification

31 March 2020

1 reference

Whole-genome genotyping of haplotype tag single nucleotide polymorphisms

31 March 2020

1 reference

Comparative genomic hybridization for molecular cytogenetic analysis of solid tumors

31 March 2020

1 reference

High resolution analysis of DNA copy number variation using comparative genomic hybridization to microarrays

31 March 2020

1 reference

Genome-wide analysis of DNA copy-number changes using cDNA microarrays

31 March 2020

1 reference

A tiling resolution DNA microarray with complete coverage of the human genome

31 March 2020

1 reference

Comparative genomic hybridization using oligonucleotide microarrays and total genomic DNA.

31 March 2020

1 reference

High resolution microarray comparative genomic hybridisation analysis using spotted oligonucleotides

31 March 2020

1 reference

Analysis of chromosome breakpoints in neuroblastoma at sub-kilobase resolution using fine-tiling oligonucleotide array CGH.

31 March 2020

1 reference

BAC to the future! or oligonucleotides: a perspective for micro array comparative genomic hybridization (array CGH)

31 March 2020

1 reference

High-resolution analysis of DNA copy number using oligonucleotide microarrays

31 March 2020

1 reference

Whole genome DNA copy number changes identified by high density oligonucleotide arrays

31 March 2020

1 reference

Molecular karyotyping using an SNP array for genomewide genotyping.

31 March 2020

1 reference

An integrated view of copy number and allelic alterations in the cancer genome using single nucleotide polymorphism arrays

31 March 2020

1 reference

Homozygous deletions and chromosome amplifications in human lung carcinomas revealed by single nucleotide polymorphism array analysis

31 March 2020

1 reference

Global analysis of uniparental disomy using high density genotyping arrays

31 March 2020

1 reference

Genomewide single nucleotide polymorphism microarray mapping in basal cell carcinomas unveils uniparental disomy as a key somatic event.

31 March 2020

1 reference

Allele-specific amplification in cancer revealed by SNP array analysis

31 March 2020

1 reference

Reliable High-Throughput Genotyping and Loss-of-Heterozygosity Detection in Formalin-Fixed, Paraffin-Embedded Tumors Using Single Nucleotide Polymorphism Arrays

31 March 2020

1 reference

Array CGH using whole genome amplification of fresh-frozen and formalin-fixed, paraffin-embedded tumor DNA.

31 March 2020

1 reference

Amplification of whole tumor genomes and gene-by-gene mapping of genomic aberrations from limited sources of fresh-frozen and paraffin-embedded DNA.

31 March 2020

1 reference

Allelic Variation in Human Gene Expression

31 March 2020

1 reference

In vivo characterization of regulatory polymorphisms by allele-specific quantification of RNA polymerase loading

31 March 2020

1 reference

Cis-acting regulatory variation in the human genome

31 March 2020

1 reference

Simultaneous genotyping, gene-expression measurement, and detection of allele-specific expression with oligonucleotide arrays

31 March 2020

1 reference

15000 unique zebrafish EST clusters and their future use in microarray for profiling gene expression patterns during embryogenesis

31 March 2020

1 reference

Detecting imbalanced expression of SNP alleles by minisequencing on microarrays

31 March 2020

1 reference

Allele quantification using molecular inversion probes (MIP).

31 March 2020

1 reference

Analysis of allelic differential expression in human white blood cells

31 March 2020

1 reference

Mapping common regulatory variants to human haplotypes

31 March 2020

1 reference

High-speed separations of DNA sequencing reactions by capillary electrophoresis

31 March 2020

1 reference

Direct allelic variation scanning of the yeast genome

31 March 2020

1 reference

Light-directed 5'-->3' synthesis of complex oligonucleotide microarrays

31 March 2020

1 reference

Emerging technologies in DNA sequencing

31 March 2020

1 reference

In situ localized amplification and contact replication of many individual DNA molecules

31 March 2020

1 reference

Fluorescent in situ sequencing on polymerase colonies

31 March 2020

1 reference

DNA analysis with multiplex microarray-enhanced PCR

31 March 2020

1 reference

Mutation detection and single-molecule counting using isothermal rolling-circle amplification

31 March 2020

1 reference

Transforming single DNA molecules into fluorescent magnetic particles for detection and enumeration of genetic variations

31 March 2020

1 reference

Massively parallel signature sequencing (MPSS) as a tool for in-depth quantitative gene expression profiling in all organisms

31 March 2020

1 reference

Gene expression analysis by massively parallel signature sequencing (MPSS) on microbead arrays

31 March 2020

1 reference

Serial analysis of gene expression

31 March 2020

1 reference

31 March 2020

1 reference

Accurate multiplex polony sequencing of an evolved bacterial genome

31 March 2020

1 reference

Genome sequencing in microfabricated high-density picolitre reactors

31 March 2020

1 reference

Termination of DNA synthesis by novel 3'-modified-deoxyribonucleoside 5'-triphosphates.

31 March 2020

1 reference

Sequence information can be obtained from single DNA molecules

31 March 2020

1 reference

A sequencing method based on real-time pyrophosphate

31 March 2020

1 reference

Toward the 1,000 dollars human genome.

31 March 2020

1 reference

Deoxynucleotides can replace dideoxynucleotides in minisequencing by arrayed primer extension

31 March 2020

1 reference

31 March 2020

1 reference

Principle and applications of digital PCR

31 March 2020

1 reference

Gene expression analysis of plant host-pathogen interactions by SuperSAGE

31 March 2020

1 reference

31 March 2020

1 reference

Genomic representations using concatenates of Type IIB restriction endonuclease digestion fragments

31 March 2020

1 reference

Elucidation of the small RNA component of the transcriptome

31 March 2020

1 reference

BEAMing up for detection and quantification of rare sequence variants

31 March 2020

1 reference

Detection and quantification of mutations in the plasma of patients with colorectal tumors

31 March 2020

1 reference

Automated high resolution optical mapping using arrayed, fluid-fixed DNA molecules

31 March 2020

1 reference

Optical mapping and its potential for large-scale sequencing projects

31 March 2020

1 reference

High-density polymerase-mediated incorporation of fluorochrome-labeled nucleotides

31 March 2020

1 reference

A microfluidic system for large DNA molecule arrays

31 March 2020

1 reference

DNA sequence of human chromosome 17 and analysis of rearrangement in the human lineage

31 March 2020

1 reference

The ENCODE (ENCyclopedia Of DNA Elements) Project

31 March 2020

1 reference

Genome-wide mapping of DNase hypersensitive sites using massively parallel signature sequencing (MPSS)

31 March 2020

1 reference

Gene identification signature (GIS) analysis for transcriptome characterization and genome annotation

31 March 2020

1 reference

Experimental annotation of the human genome using microarray technology

31 March 2020

1 reference

Transcriptional maps of 10 human chromosomes at 5-nucleotide resolution

31 March 2020

1 reference

Large-scale transcriptional activity in chromosomes 21 and 22

31 March 2020

1 reference

Direct isolation and identification of promoters in the human genome

31 March 2020

1 reference

Genome-wide location and function of DNA binding proteins

31 March 2020

1 reference

A high-resolution map of active promoters in the human genome

31 March 2020

1 reference

The transcriptional landscape of the mammalian genome

31 March 2020

1 reference

Chromosome-wide mapping of estrogen receptor binding reveals long-range regulation requiring the forkhead protein FoxA1

31 March 2020

1 reference

Combinatorial analysis of transcription factor partners reveals recruitment of c-MYC to estrogen receptor-alpha responsive promoters.

31 March 2020

1 reference

A global transcriptional regulatory role for c-Myc in Burkitt's lymphoma cells

31 March 2020

1 reference

31 March 2020

1 reference

Mapping of genetic and epigenetic regulatory networks using microarrays

31 March 2020

1 reference

Genome-wide map of nucleosome acetylation and methylation in yeast

31 March 2020

1 reference

Genomic maps and comparative analysis of histone modifications in human and mouse

31 March 2020

1 reference

Epigenomic profiling using microarrays

31 March 2020

1 reference

DNA methylation profiling of the human major histocompatibility complex: a pilot study for the human epigenome project

31 March 2020

1 reference

A blueprint for a Human Epigenome Project: the AACR Human Epigenome Workshop

31 March 2020

1 reference

31 March 2020

From genome to epigenome

1 reference

Gene silencing. Methylation meets acetylation

31 March 2020

1 reference

Gene silencing in cancer in association with promoter hypermethylation

31 March 2020

1 reference

Methylation-Specific Oligonucleotide Microarray: A New Potential for High-Throughput Methylation Analysis

31 March 2020

1 reference

Tumour class prediction and discovery by microarray-based DNA methylation analysis

31 March 2020

1 reference

High-throughput DNA methylation profiling using universal bead arrays

31 March 2020

1 reference

Multiplexed profiling of candidate genes for CpG island methylation status using a flexible PCR/LDR/Universal Array assay

31 March 2020

1 reference

Profiling DNA methylation patterns using genomic tiling microarrays.

31 March 2020

1 reference

Microarray-based DNA methylation profiling: technology and applications

31 March 2020

1 reference

CpG Island microarray probe sequences derived from a physical library are representative of CpG Islands annotated on the human genome

31 March 2020

1 reference

Chromosome-wide and promoter-specific analyses identify sites of differential DNA methylation in normal and transformed human cells

31 March 2020

1 reference

31 March 2020

The Hallmarks of Cancer

1 reference

Integrative analysis of the cancer transcriptome

31 March 2020

1 reference

Mining for regulatory programs in the cancer transcriptome

31 March 2020

1 reference

Decoding randomly ordered DNA arrays

31 March 2020

1 reference

The ligase chain reaction in a PCR world

31 March 2020

1 reference

7 January 2021

inferred from DOI database lookup

Multiplex PCR: advantages, development, and applications

1 reference

7 January 2021

inferred from DOI database lookup

Cis-acting variation in the expression of a high proportion of genes in human brain

1 reference

7 January 2021

inferred from DOI database lookup

Identifiers

DOI

10.1038/NRG1901

1 reference

Dimensions publication ID

30 July 2017

1030165308

0 references

Fatcat ID

release_l3ein3vcrfb35awfd7osieehm4

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/l3ein3vcrfb35awfd7osieehm4

24 November 2022

mapped directly with Wikidata item

1 reference