RseqFlow: workflows for RNA-Seq data analysis (Q33973293)

30 July 2017

RseqFlow: workflows for RNA-Seq data analysis (English)

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30 July 2017

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12

Ewa Deelman

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30 July 2017

Ying Wang

1

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30 July 2017

Gaurang Mehta

2

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30 July 2017

Rajiv Mayani

3

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30 July 2017

Jingxi Lu

4

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30 July 2017

Tade Souaiaia

5

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30 July 2017

Yangho Chen

6

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30 July 2017

Andrew Clark

7

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30 July 2017

Hee Jae Yoon

8

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30 July 2017

Lin Wan

9

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30 July 2017

Oleg V Evgrafov

10

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30 July 2017

James A Knowles

11

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30 July 2017

Ting Chen

13

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30 July 2017

language of work or name

English

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publication date

27 July 2011

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30 July 2017

3

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based on heuristic

inferred from page(s)

published in

Bioinformatics

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30 July 2017

27

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30 July 2017

2598-2600

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30 July 2017

18

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A pipeline for RNA-seq data processing and quality assessment

30 July 2017

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3167055

RSEQtools: a modular framework to analyze RNA-Seq data using compact, anonymized data summaries

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3167055

Differential expression analysis for sequence count data

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3167055

A two-parameter generalized Poisson model to improve the analysis of RNA-seq data

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3167055

inGAP: an integrated next-generation genome analysis pipeline

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3167055

PerM: efficient mapping of short sequencing reads with periodic full sensitive spaced seeds

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3167055

Fast and accurate short read alignment with Burrows-Wheeler transform

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3167055

Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3167055

Statistical inferences for isoform expression in RNA-Seq

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3167055

RNA-seq: an assessment of technical reproducibility and comparison with gene expression arrays

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3167055

Mapping and quantifying mammalian transcriptomes by RNA-Seq

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3167055

10.1093/BIOINFORMATICS/BTR441

5 July 2018

Identifiers

DOI

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journals/bioinformatics/WangMMLSCCYWEKDC11

30 July 2017

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DBLP Dataset 2021-01-02

release_fadazmny55gj3lj4ziv5cj33dy

28 January 2021

Fatcat ID

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/fadazmny55gj3lj4ziv5cj33dy

mapped directly with Wikidata item

24 November 2022

based on heuristic

PMCID

3167055

1 reference

30 July 2017

1 reference