Deep sequencing of small RNAs specifically associated with Arabidopsis AGO1 and AGO4 uncovers new AGO functions (Q33860348)

29 July 2017

Deep sequencing of small RNAs specifically associated with Arabidopsis AGO1 and AGO4 uncovers new AGO functions (English)

1 reference

29 July 2017

8

1 reference

29 July 2017

9

Thomas Tuschl

1 reference

29 July 2017

Huan Wang

1

1 reference

29 July 2017

Xiuren Zhang

2

1 reference

29 July 2017

Jun Liu

3

1 reference

29 July 2017

Takatoshi Kiba

4

1 reference

29 July 2017

Takatoshi Kiba

5

1 reference

29 July 2017

Jongchan Woo

6

1 reference

29 July 2017

Tolulope Ojo

7

1 reference

29 July 2017

Nam-Hai Chua

10

1 reference

29 July 2017

Xiu-Jie Wang

11

1 reference

29 July 2017

10 May 2011

1 reference

29 July 2017

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29 July 2017

67

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29 July 2017

2

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29 July 2017

292-304

1 reference

describes a project that uses

29 July 2017

ImageJ

1 reference

11 June 2022

https://www.ebi.ac.uk/europepmc/webservices/rest/PMC3135789/fullTextXML

based on heuristic

inferred from PubMed Central ID database lookup

cites work

Multiple distinct small RNAs originate from the same microRNA precursors

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3135789

22-Nucleotide RNAs trigger secondary siRNA biogenesis in plants

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3135789

siRNAs from miRNA sites mediate DNA methylation of target genes

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3135789

Arabidopsis lyrata small RNAs: transient MIRNA and small interfering RNA loci within the Arabidopsis genus

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3135789

MicroRNA and tasiRNA diversity in mature pollen of Arabidopsis thaliana

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3135789

Uncovering small RNA-mediated responses to phosphate deficiency in Arabidopsis by deep sequencing

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3135789

An effector of RNA-directed DNA methylation in arabidopsis is an ARGONAUTE 4- and RNA-binding protein.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3135789

Conserved and novel miRNAs in the legume Phaseolus vulgaris in response to stress

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3135789

Structure of HIV-1 protease in complex with potent inhibitor KNI-272 determined by high-resolution X-ray and neutron crystallography

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3135789

RNA-mediated chromatin-based silencing in plants

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3135789

Triggering the formation of tasiRNAs in Arabidopsis thaliana: the role of microRNA miR173.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3135789

AGO1-miR173 complex initiates phased siRNA formation in plants

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3135789

Noncoding transcription by RNA polymerase Pol IVb/Pol V mediates transcriptional silencing of overlapping and adjacent genes

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3135789

Roles of RNA polymerase IV in gene silencing

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3135789

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3135789

The mechanism selecting the guide strand from small RNA duplexes is different among argonaute proteins.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3135789

Specificity of ARGONAUTE7-miR390 interaction and dual functionality in TAS3 trans-acting siRNA formation

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3135789

Sorting of small RNAs into Arabidopsis argonaute complexes is directed by the 5' terminal nucleotide

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3135789

PolIVb influences RNA-directed DNA methylation independently of its role in siRNA biogenesis

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3135789

Identification of microRNAs and other small regulatory RNAs using cDNA library sequencing

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3135789

A mammalian microRNA expression atlas based on small RNA library sequencing

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3135789

Common functions for diverse small RNAs of land plants

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3135789

Agrobacterium-mediated transformation of Arabidopsis thaliana using the floral dip method

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3135789

Arabidopsis primary microRNA processing proteins HYL1 and DCL1 define a nuclear body distinct from the Cajal body

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3135789

Role of RNA polymerase IV in plant small RNA metabolism

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3135789

High-throughput sequencing of Arabidopsis microRNAs: evidence for frequent birth and death of MIRNA genes

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3135789

Genome-wide profiling and analysis of Arabidopsis siRNAs

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3135789

Cucumber mosaic virus-encoded 2b suppressor inhibits Arabidopsis Argonaute1 cleavage activity to counter plant defense

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3135789

Prediction of trans-antisense transcripts in Arabidopsis thaliana

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3135789

MicroRNAs and other small RNAs enriched in the Arabidopsis RNA-dependent RNA polymerase-2 mutant

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3135789

Uncovering RNAi mechanisms in plants: biochemistry enters the foray

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3135789

Arabidopsis ARGONAUTE1 is an RNA Slicer that selectively recruits microRNAs and short interfering RNAs

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3135789

The AIP2 E3 ligase acts as a novel negative regulator of ABA signaling by promoting ABI3 degradation

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3135789

microRNA-directed phasing during trans-acting siRNA biogenesis in plants

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3135789

Genome-wide prediction and identification of cis-natural antisense transcripts in Arabidopsis thaliana

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3135789

Endogenous trans-acting siRNAs regulate the accumulation of Arabidopsis mRNAs

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3135789

Mechanisms of gene silencing by double-stranded RNA

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3135789

Novel and stress-regulated microRNAs and other small RNAs from Arabidopsis

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3135789

The action of ARGONAUTE1 in the miRNA pathway and its regulation by the miRNA pathway are crucial for plant development.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3135789

MicroRNAs: genomics, biogenesis, mechanism, and function

5 July 2018

2 references

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3135789

5 July 2018

https://api.crossref.org/works/10.1111%2FJ.1365-313X.2011.04594.X

Distinct mechanisms determine transposon inheritance and methylation via small interfering RNA and histone modification

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3135789

Mfold web server for nucleic acid folding and hybridization prediction

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3135789

ARGONAUTE4 control of locus-specific siRNA accumulation and DNA and histone methylation

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3135789

RNA silencing genes control de novo DNA methylation

5 July 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-313X.2011.04594.X

MicroRNA gene evolution in Arabidopsis lyrata and Arabidopsis thaliana

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-313X.2011.04594.X

Effects of sulfur nutrition on expression of the soybean seed storage protein genes in transgenic petunia.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-313X.2011.04594.X

The interaction between DCL1 and HYL1 is important for efficient and precise processing of pri-miRNA in plant microRNA biogenesis.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-313X.2011.04594.X

Criteria for annotation of plant MicroRNAs

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-313X.2011.04594.X

Distinct catalytic and non-catalytic roles of ARGONAUTE4 in RNA-directed DNA methylation.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-313X.2011.04594.X

Novel micro-RNAs and intermediates of micro-RNA biogenesis from moss.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-313X.2011.04594.X

Role of Arabidopsis ARGONAUTE4 in RNA-directed DNA methylation triggered by inverted repeats.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-313X.2011.04594.X

10.1111/J.1365-313X.2011.04594.X

21 January 2018

Identifiers

DOI

1 reference

release_kv6noabmynfrfb3ydldh6i6hke

29 July 2017

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/kv6noabmynfrfb3ydldh6i6hke

mapped directly with Wikidata item

24 November 2022

based on heuristic

PMCID

3135789

1 reference

29 July 2017

1 reference