Realistic artificial DNA sequences as negative controls for computational genomics (Q33843036)

29 July 2017

Realistic artificial DNA sequences as negative controls for computational genomics (English)

1 reference

29 July 2017

computational biology

1 reference

based on heuristic

inferred from title

computational genomics

1 reference

4

1 reference

29 July 2017

3

Leroy Hood

0 references

Arian F. A. Smit

series ordinal

2

object named as

Arian F A Smit

1 reference

29 July 2017

Juan Caballero

1

1 reference

PubMed ID

24803667

29 July 2017

language of work or name

English

0 references

publication date

6 May 2014

1 reference

29 July 2017

Nucleic Acids Research

1 reference

29 July 2017

42

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29 July 2017

12

1 reference

29 July 2017

e99

1 reference

Creative Commons Attribution 3.0 Unported

29 July 2017

start time

4 October 2016

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

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Repetitive elements may comprise over two-thirds of the human genome

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5 July 2018

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Most "dark matter" transcripts are associated with known genes

5 July 2018

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5 July 2018

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5 July 2018

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5 July 2018

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Genome analysis of the platypus reveals unique signatures of evolution

5 July 2018

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The impact of next-generation sequencing technology on genetics

5 July 2018

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Initial sequence and comparative analysis of the cat genome

5 July 2018

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Human genome ultraconserved elements are ultraselected

5 July 2018

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5 July 2018

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Genome of the marsupial Monodelphis domestica reveals innovation in non-coding sequences

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Evolutionary and Biomedical Insights from the Rhesus Macaque Genome

5 July 2018

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5 July 2018

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Anticipating the 1,000 dollar genome

5 July 2018

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The genome of the sea urchin Strongylocentrotus purpuratus

5 July 2018

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Insights into social insects from the genome of the honeybee Apis mellifera

5 July 2018

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5 July 2018

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A third approach to gene prediction suggests thousands of additional human transcribed regions

5 July 2018

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5 July 2018

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5 July 2018

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5 July 2018

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5 July 2018

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5 July 2018

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5 July 2018

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Efficient decoding algorithms for generalized hidden Markov model gene finders

5 July 2018

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Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution

5 July 2018

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5 July 2018

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Genome sequence of the Brown Norway rat yields insights into mammalian evolution

5 July 2018

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Rfam: an RNA family database

5 July 2018

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The Draft Genome of Ciona intestinalis: Insights into Chordate and Vertebrate Origins

5 July 2018

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Initial sequencing and comparative analysis of the mouse genome

5 July 2018

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The Genome Sequence of the Malaria Mosquito Anopheles gambiae

5 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4081056

Whole-Genome Shotgun Assembly and Analysis of the Genome of Fugu rubripes

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4081056

A memory-efficient dynamic programming algorithm for optimal alignment of a sequence to an RNA secondary structure

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4081056

Initial sequencing and analysis of the human genome

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4081056

The genome sequence of Drosophila melanogaster

5 July 2018

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A computational screen for methylation guide snoRNAs in yeast

5 July 2018

1 reference

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Tandem repeats finder: a program to analyze DNA sequences

5 July 2018

1 reference

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Genome sequence of the nematode C. elegans: a platform for investigating biology

5 July 2018

1 reference

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Seq-Gen: an application for the Monte Carlo simulation of DNA sequence evolution along phylogenetic trees

5 July 2018

1 reference

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Prediction of complete gene structures in human genomic DNA

5 July 2018

1 reference

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tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence

5 July 2018

1 reference

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Analysis of compositionally biased regions in sequence databases

5 July 2018

1 reference

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Significance of nucleotide sequence alignments: a method for random sequence permutation that preserves dinucleotide and codon usage.

5 July 2018

1 reference

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Basic local alignment search tool

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4081056

Using multiple alignments to improve gene prediction.

5 July 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKU356

Transcription-associated mutational asymmetry in mammalian evolution

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKU356

Robustness and fragility in immunosenescence

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKU356

GESTALT: a workbench for automatic integration and visualization of large-scale genomic sequence analyses.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKU356

Tools for simulating evolution of aligned genomic regions with integrated parameter estimation

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKU356

In silico sequence evolution with site-specific interactions along phylogenetic trees.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKU356

The ENCODE project: missteps overshadowing a success

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKU356

21 January 2018

Identifiers

DOI

10.1093/NAR/GKU356

1 reference

29 July 2017

1 reference

29 July 2017

1 reference

PubMed ID

24803667