Deep RNA sequencing at single base-pair resolution reveals high complexity of the rice transcriptome (Q33543635)

27 July 2017

Deep RNA sequencing at single base-pair resolution reveals high complexity of the rice transcriptome (English)

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27 July 2017

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Qiye Li

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Guojie Zhang

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Guojie Zhang

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Jun Wang

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Jun Wang

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Karsten Kristiansen

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Karsten Kristiansen

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Huanming Yang

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Jian Wang

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Xiuqing Zhang

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Ruiqiang Li

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Guangwu Guo

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Xueda Hu

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Yong Zhang

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Ruhong Zhuang

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Zhike Lu

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Zengquan He

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Xiaodong Fang

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Li Chen

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Wei Tian

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Yong Tao

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Songgang Li

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19 March 2010

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646-654

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5

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describes a project that uses

27 July 2017

Cytoscape

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9 June 2022

https://europepmc.org/search?query=(METHODS:'Cytoscape')

inferred from PubMed Central ID database lookup

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21 June 2018

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21 June 2018

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21 June 2018

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21 June 2018

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21 June 2018

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21 June 2018

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21 June 2018

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Towards a better bowl of rice: assigning function to tens of thousands of rice genes

21 June 2018

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21 June 2018

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Global identification and characterization of transcriptionally active regions in the rice genome

21 June 2018

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21 June 2018

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Alternative splicing: new insights from global analyses

21 June 2018

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Genomewide comparative analysis of alternative splicing in plants

21 June 2018

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21 June 2018

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Alternative trans-splicing: a novel mode of pre-mRNA processing

21 June 2018

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The Rice Annotation Project Database (RAP-DB): hub for Oryza sativa ssp. japonica genome information

21 June 2018

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Tandem chimerism as a means to increase protein complexity in the human genome

21 June 2018

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21 June 2018

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Understanding alternative splicing: towards a cellular code

21 June 2018

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Alternative trans-splicing of constant and variable exons of a Drosophila axon guidance gene, lola

21 June 2018

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Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice

21 June 2018

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Mechanisms of alternative pre-messenger RNA splicing

21 June 2018

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Regulation of translational initiation in plants.

21 June 2018

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Alternative pre-mRNA splicing and proteome expansion in metazoans

21 June 2018

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A Draft Sequence of the Rice Genome (Oryza sativa L. ssp. japonica)

21 June 2018

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A Draft Sequence of the Rice Genome (Oryza sativa L. ssp. indica)

21 June 2018

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Intergenic mRNA molecules resulting from trans-splicing

21 June 2018

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Transgene analysis proves mRNA trans-splicing at the complex mod(mdg4) locus in Drosophila.

21 June 2018

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Novel alternative splicing and nuclear localization of human RGS12 gene products

21 June 2018

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21 June 2018

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21 June 2018

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21 June 2018

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The product of the yeast UPF1 gene is required for rapid turnover of mRNAs containing a premature translational termination codon

21 June 2018

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21 June 2018

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Short homologous sequences are strongly associated with the generation of chimeric RNAs in eukaryotes.

21 June 2018

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Deep sequencing-based expression analysis shows major advances in robustness, resolution and inter-lab portability over five microarray platforms

31 October 2018

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Genome-wide midrange transcription profiles reveal expression level relationships in human tissue specification.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2860166

Intron retention is a major phenomenon in alternative splicing in Arabidopsis.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2860166

RNA maturation of the rice SPK gene may involve trans-splicing.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2860166

Mouse transcriptome: neutral evolution of 'non-coding' complementary DNAs

31 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/20305017

12 December 2020

inferred from PubMed ID database lookup

Evidence for in vivo trans splicing of pre-mRNAs in tobacco chloroplasts

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/20305017

12 December 2020

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Construction of a novel database containing aberrant splicing mutations of mammalian genes

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/20305017

12 December 2020

inferred from PubMed ID database lookup

Identifiers

DOI

10.1101/GR.100677.109

1 reference

27 July 2017

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27 July 2017

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