Topological analysis of a haloacid permease of a Burkholderia sp. bacterium with a PhoA-LacZ reporter (Q33514142)

27 July 2017

Topological analysis of a haloacid permease of a Burkholderia sp. bacterium with a PhoA-LacZ reporter (English)

1 reference

27 July 2017

Yuk Man Tse

1

1 reference

27 July 2017

Manda Yu

series ordinal

2

1 reference

27 July 2017

Jimmy S H Tsang

series ordinal

3

1 reference

27 July 2017

31 October 2009

1 reference

27 July 2017

1 reference

27 July 2017

9

1 reference

27 July 2017

233

1 reference

https://scigraph.springernature.com/pub.10.1186/1471-2180-9-233

27 July 2017

0 references

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21 June 2018

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21 June 2018

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Isolation and characterization of a novel haloacid permease from Burkholderia cepacia MBA4.

21 June 2018

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21 June 2018

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Structure of the multidrug transporter EmrD from Escherichia coli

21 June 2018

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Biogenesis of CFTR and other polytopic membrane proteins: new roles for the ribosome-translocon complex

21 June 2018

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Monochloroacetic acid inhibits liver gluconeogenesis by inactivating glyceraldehyde-3-phosphate dehydrogenase

21 June 2018

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A combined transmembrane topology and signal peptide prediction method

21 June 2018

1 reference

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Projection structure of the bacterial oxalate transporter OxlT at 3.4A resolution.

21 June 2018

1 reference

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Structure and mechanism of the glycerol-3-phosphate transporter from Escherichia coli

21 June 2018

1 reference

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Structure and mechanism of the lactose permease of Escherichia coli

21 June 2018

1 reference

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PSORT-B: Improving protein subcellular localization prediction for Gram-negative bacteria

21 June 2018

1 reference

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Structural model for 12-helix transporters belonging to the major facilitator superfamily

21 June 2018

1 reference

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The transporter classification (TC) system, 2002

21 June 2018

1 reference

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Analysis of the cytotoxicity and mutagenicity of drinking water disinfection by-products in Salmonella typhimurium

21 June 2018

1 reference

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The HMMTOP transmembrane topology prediction server

21 June 2018

1 reference

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Specificity and topology of the Escherichia coli xanthosine permease, a representative of the NHS subfamily of the major facilitator superfamily

21 June 2018

1 reference

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Maximal expression of membrane-bound nitrate reductase in Paracoccus is induced by nitrate via a third FNR-like regulator named NarR

21 June 2018

1 reference

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Topology of OxlT, the oxalate transporter of Oxalobacter formigenes, determined by site-directed fluorescence labeling

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2777183

Predicting transmembrane protein topology with a hidden Markov model: application to complete genomes

21 June 2018

1 reference

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The PSIPRED protein structure prediction server

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2777183

A functional-phylogenetic classification system for transmembrane solute transporters

21 June 2018

1 reference

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EMBOSS: the European Molecular Biology Open Software Suite

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2777183

Membrane topology of the Rickettsia prowazekii ATP/ADP translocase revealed by novel dual pho-lac reporters

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2777183

SOSUI: classification and secondary structure prediction system for membrane proteins

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2777183

Major facilitator superfamily

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2777183

Combining evidence using p-values: application to sequence homology searches

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2777183

Prediction of transmembrane alpha-helices in prokaryotic membrane proteins: the dense alignment surface method

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2777183

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2777183

Biosynthesis of halogenated metabolites by bacteria

21 June 2018

1 reference

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Topology prediction for helical transmembrane proteins at 86% accuracy

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2777183

Topogenesis of inner membrane proteins of mitochondria

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2777183

Topology prediction of membrane proteins

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2777183

Membrane topology model of Escherichia coli alpha-ketoglutarate permease by phoA fusion analysis

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2777183

Beta-galactosidase is inactivated by intermolecular disulfide bonds and is toxic when secreted to the periplasm of Escherichia coli.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2777183

Fitting a mixture model by expectation maximization to discover motifs in biopolymers

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2777183

A simple method for displaying the hydropathic character of a protein

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2777183

The hydrophobic moment detects periodicity in protein hydrophobicity

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2777183

A genetic approach to analyzing membrane protein topology.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2777183

Improved tools for biological sequence comparison

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2777183

Uses of lac fusions for the study of biological problems

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2777183

Nucleotide sequence homology of the tetracycline-resistance determinant naturally maintained in Bacillus subtilis Marburg 168 chromosome and the tetracycline-resistance gene of B. subtilis plasmid pNS1981.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2777183

Sequence logos: a new way to display consensus sequences

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2777183

Homologous sugar transport proteins in Escherichia coli and their relatives in both prokaryotes and eukaryotes

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2777183

Chloroplast protein topogenesis: import, sorting and assembly

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2777183

Analysis of membrane protein topology using alkaline phosphatase and beta-galactosidase gene fusions

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2777183

Proteolytic control of protein topogenesis

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2777183

TOPCONS: consensus prediction of membrane protein topology

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2777183

Confronting fusion protein-based membrane protein topology mapping with reality: the Escherichia coli ClcA H+/Cl- exchange transporter.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2777183

Molecular code for transmembrane-helix recognition by the Sec61 translocon

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2777183

Use of ribosomal promoters from Burkholderia cenocepacia and Burkholderia cepacia for improved expression of transporter protein in Escherichia coli.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2777183

Best alpha-helical transmembrane protein topology predictions are achieved using hidden Markov models and evolutionary information

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2777183

Kinetics of monochloroacetic acid at subtoxic and toxic doses in rats after single oral and dermal administrations

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2777183

A single negatively charged residue affects the orientation of a membrane protein in the inner membrane of Escherichia coli only when it is located adjacent to a transmembrane domain.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2777183

Topology of the Na+/proline transporter of Escherichia coli

31 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/19878597

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

beta-Galactosidase alpha-complementation. Overlapping sequences

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/19878597

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1186/1471-2180-9-233

1 reference

Dimensions Publication ID

27 July 2017

1032497315

0 references

Fatcat ID

release_2egumgiezbdxvb4spcavd7gkk4

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/2egumgiezbdxvb4spcavd7gkk4

mapped directly with Wikidata item

24 November 2022

based on heuristic

PMCID

2777183

1 reference

27 July 2017

1 reference