Mutational analysis of betaCOP (Sec26p) identifies an appendage domain critical for function (Q33315718)

25 July 2017

Mutational analysis of betaCOP (Sec26p) identifies an appendage domain critical for function (English)

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25 July 2017

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Carol J DeRegis

1

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25 July 2017

Peter B Rahl

2

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25 July 2017

Gregory R Hoffman

3

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25 July 2017

Richard A Cerione

4

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25 July 2017

Ruth N Collins

5

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25 July 2017

22 January 2008

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25 July 2017

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25 July 2017

9

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25 July 2017

3

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https://scigraph.springernature.com/pub.10.1186/1471-2121-9-3

25 July 2017

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cites work

Two human ARFGAPs associated with COP-I-coated vesicles.

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Role of the AP2 beta-appendage hub in recruiting partners for clathrin-coated vesicle assembly

21 June 2018

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ARF proteins: roles in membrane traffic and beyond

21 June 2018

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Arf GAPs and membrane traffic

21 June 2018

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Stomach-specific calpain, nCL-2, localizes in mucus cells and proteolyzes the beta-subunit of coatomer complex, beta-COP.

21 June 2018

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Arf family GTPases: roles in membrane traffic and microtubule dynamics

21 June 2018

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Localization and function of Arf family GTPases

21 June 2018

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Protein structure prediction servers at University College London

21 June 2018

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Multiple activities for Arf1 at the Golgi complex

21 June 2018

1 reference

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ArfGAP1 responds to membrane curvature through the folding of a lipid packing sensor motif.

21 June 2018

1 reference

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ARFGAP1 plays a central role in coupling COPI cargo sorting with vesicle formation.

21 June 2018

1 reference

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Genetic analysis of yeast Yip1p function reveals a requirement for Golgi-localized rab proteins and rab-Guanine nucleotide dissociation inhibitor

21 June 2018

1 reference

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Natively unfolded domains in endocytosis: hooks, lines and linkers.

21 June 2018

1 reference

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Evolving nature of the AP2 alpha-appendage hub during clathrin-coated vesicle endocytosis

21 June 2018

1 reference

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COP and clathrin-coated vesicle budding: different pathways, common approaches

21 June 2018

1 reference

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The ArfGAP Glo3 is required for the generation of COPI vesicles

21 June 2018

1 reference

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Arf GAPs: multifunctional proteins that regulate membrane traffic and actin remodelling

21 June 2018

1 reference

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The alpha- and beta'-COP WD40 domains mediate cargo-selective interactions with distinct di-lysine motifs

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2262067

Gamma-COP appendage domain - structure and function

21 June 2018

1 reference

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Conserved structural motifs in intracellular trafficking pathways: structure of the gammaCOP appendage domain

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2262067

ER-to-Golgi transport: COP I and COP II function (Review).

21 June 2018

1 reference

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Arf and its many interactors

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2262067

EVA: Evaluation of protein structure prediction servers.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2262067

Four ARF GAPs in Saccharomyces cerevisiae have both overlapping and distinct functions

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2262067

ARF1 regulatory factors and COPI vesicle formation

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2262067

Gamma-adaptin appendage domain: structure and binding site for Eps15 and gamma-synergin

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2262067

Activity of specific lipid-regulated ADP ribosylation factor-GTPase-activating proteins is required for Sec14p-dependent Golgi secretory function in yeast

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2262067

Clathrin-protein interactions

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2262067

Molecular architecture and functional model of the endocytic AP2 complex

21 June 2018

1 reference

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Getting started with yeast

21 June 2018

1 reference

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Accessory protein recruitment motifs in clathrin-mediated endocytosis

21 June 2018

1 reference

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EVA: large-scale analysis of secondary structure prediction

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2262067

The Gcs1 and Age2 ArfGAP proteins provide overlapping essential function for transport from the yeast trans-Golgi network

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2262067

Adaptins: the final recount

21 June 2018

1 reference

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Accessory factors in clathrin-dependent synaptic vesicle endocytosis

21 June 2018

1 reference

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Three ways to make a vesicle

21 June 2018

1 reference

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Traffic COPs of the early secretory pathway

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2262067

The structure and function of the beta 2-adaptin appendage domain

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2262067

COP I domains required for coatomer integrity, and novel interactions with ARF and ARF-GAP

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2262067

The PSIPRED protein structure prediction server

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2262067

Turning on ARF: the Sec7 family of guanine-nucleotide-exchange factors

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2262067

A role for ADP ribosylation factor in the control of cargo uptake during COPI-coated vesicle biogenesis

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2262067

Protein secondary structure prediction based on position-specific scoring matrices

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2262067

Crystal structure of the alpha appendage of AP-2 reveals a recruitment platform for clathrin-coat assembly

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2262067

A structural explanation for the binding of multiple ligands by the alpha-adaptin appendage domain

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2262067

GenTHREADER: an efficient and reliable protein fold recognition method for genomic sequences

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2262067

Retrograde transport from the yeast Golgi is mediated by two ARF GAP proteins with overlapping function.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2262067

A family of Arf effectors defined as suppressors of the loss of Arf function in the yeast Saccharomyces cerevisiae

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2262067

epsilon-COP is a structural component of coatomer that functions to stabilize alpha-COP

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2262067

The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2262067

Saccharomyces cerevisiae Gcs1 is an ADP-ribosylation factor GTPase-activating protein

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2262067

Bimodal interaction of coatomer with the p24 family of putative cargo receptors

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2262067

The ARF1 GTPase-activating protein: zinc finger motif and Golgi complex localization

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2262067

En bloc incorporation of coatomer subunits during the assembly of COP-coated vesicles

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2262067

Deep-etch visualization of proteins involved in clathrin assembly

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2262067

A system of shuttle vectors and yeast host strains designed for efficient manipulation of DNA in Saccharomyces cerevisiae

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2262067

Human ADP-ribosylation factors. A functionally conserved family of GTP-binding proteins

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2262067

'Coatomer': a cytosolic protein complex containing subunits of non-clathrin-coated Golgi transport vesicles

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2262067

A coat subunit of Golgi-derived non-clathrin-coated vesicles with homology to the clathrin-coated vesicle coat protein beta-adaptin.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2262067

Sec2 protein contains a coiled-coil domain essential for vesicular transport and a dispensable carboxy terminal domain

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2262067

Construction of a GAL1-regulated yeast cDNA expression library and its application to the identification of genes whose overexpression causes lethality in yeast

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2262067

Molecular switches involving the AP-2 beta2 appendage regulate endocytic cargo selection and clathrin coat assembly

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2262067

Elp1p, the yeast homolog of the FD disease syndrome protein, negatively regulates exocytosis independently of transcriptional elongation

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2262067

Lipid packing sensed by ArfGAP1 couples COPI coat disassembly to membrane bilayer curvature

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2262067

Improvement of the GenTHREADER method for genomic fold recognition

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2262067

Sorting of Golgi resident proteins into different subpopulations of COPI vesicles: a role for ArfGAP1.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2262067

Phylogenetic analysis of components of the eukaryotic vesicle transport system reveals a common origin of adaptor protein complexes 1, 2, and 3 and the F subcomplex of the coatomer COPI

31 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/18211691

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Structural and functional analysis of the ARF1-ARFGAP complex reveals a role for coatomer in GTP hydrolysis

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/18211691

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

The Arf1p GTPase-activating protein Glo3p executes its regulatory function through a conserved repeat motif at its C-terminus

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/18211691

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1186/1471-2121-9-3

1 reference

Dimensions Publication ID

25 July 2017

0 references

1 reference

25 July 2017

1 reference