Sample matching by inferred agonal stress in gene expression analyses of the brain (Q33300170)

25 July 2017

Sample matching by inferred agonal stress in gene expression analyses of the brain (English)

1 reference

25 July 2017

Simon J Evans

4

0 references

Hiroaki Tomita

object named as

Hiroaki Tomita

6

0 references

Prabhakara Choudary

object named as

Prabhakara V Choudary

5

0 references

Huda Akil

13

object named as

Huda Akil

1 reference

25 July 2017

Jun Z Li

1

1 reference

25 July 2017

Fan Meng

2

1 reference

25 July 2017

Larisa Tsavaler

3

1 reference

25 July 2017

Marquis P Vawter

7

1 reference

25 July 2017

David Walsh

8

1 reference

25 July 2017

Vida Shokoohi

9

1 reference

25 July 2017

Tisha Chung

10

1 reference

25 July 2017

William E Bunney

11

1 reference

25 July 2017

Edward G Jones

12

1 reference

25 July 2017

Stanley J Watson

14

1 reference

25 July 2017

Richard M Myers

15

1 reference

25 July 2017

language of work or name

English

0 references

publication date

24 September 2007

1 reference

25 July 2017

1 reference

25 July 2017

8

1 reference

25 July 2017

336

1 reference

https://scigraph.springernature.com/pub.10.1186/1471-2164-8-336

25 July 2017

0 references

cites work

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Principal components analysis corrects for stratification in genome-wide association studies

21 June 2018

1 reference

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Downregulation in components of the mitochondrial electron transport chain in the postmortem frontal cortex of subjects with bipolar disorder.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2213675

Mitochondrial-related gene expression changes are sensitive to agonal-pH state: implications for brain disorders

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2213675

Logistic regression protects against population structure in genetic association studies

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2213675

Evolving gene/transcript definitions significantly alter the interpretation of GeneChip data

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2213675

Comparative gene expression analysis of blood and brain provides concurrent validation of SELENBP1 up-regulation in schizophrenia

21 June 2018

1 reference

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In silico microdissection of microarray data from heterogeneous cell populations

21 June 2018

1 reference

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Estimation of individual admixture: analytical and study design considerations

21 June 2018

1 reference

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Population structure, admixture, and aging-related phenotypes in African American adults: the Cardiovascular Health Study

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2213675

Dysregulation of the fibroblast growth factor system in major depression

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2213675

Mitochondrial dysfunction in schizophrenia: evidence for compromised brain metabolism and oxidative stress

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2213675

The effects of human population structure on large genetic association studies

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2213675

Assessing the impact of population stratification on genetic association studies

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2213675

Mixture models for assessing differential expression in complex tissues using microarray data

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2213675

Effect of agonal and postmortem factors on gene expression profile: quality control in microarray analyses of postmortem human brain

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2213675

Matching strategies for genetic association studies in structured populations

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2213675

In silico dissection of cell-type-associated patterns of gene expression in prostate cancer

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2213675

Informativeness of genetic markers for inference of ancestry.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2213675

Identifying biological themes within lists of genes with EASE

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2213675

Expression deconvolution: a reinterpretation of DNA microarray data reveals dynamic changes in cell populations

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2213675

Control of confounding of genetic associations in stratified populations

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2213675

Biochemical and molecular studies using human autopsy brain tissue

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2213675

Summaries of Affymetrix GeneChip probe level data

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2213675

Human population genetic structure and inference of group membership

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2213675

Diagnosis of multiple cancer types by shrunken centroids of gene expression

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2213675

Project normal: defining normal variance in mouse gene expression

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2213675

Separation of samples into their constituents using gene expression data

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2213675

Genomic control for association studies

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2213675

Accounting for unmeasured population substructure in case-control studies of genetic association using a novel latent-class model

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2213675

Detecting association in a case-control study while correcting for population stratification

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2213675

Inference of population structure using multilocus genotype data

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2213675

Association mapping in structured populations

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2213675

The power of genomic control

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2213675

Molecular classification of cancer: class discovery and class prediction by gene expression monitoring

21 June 2018

1 reference

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Gm3;5,13,14 and type 2 diabetes mellitus: an association in American Indians with genetic admixture

21 June 2018

1 reference

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Effect of pre- and postmortem variables on specific mRNA levels in human brain.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2213675

Brain pH has a significant impact on human postmortem hippocampal gene expression profiles.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2213675

Properties of structured association approaches to detecting population stratification.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2213675

Altered expression of mitochondria-related genes in postmortem brains of patients with bipolar disorder or schizophrenia, as revealed by large-scale DNA microarray analysis.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2213675

Systematic changes in gene expression in postmortem human brains associated with tissue pH and terminal medical conditions

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2213675

Quantifying mRNA in postmortem human brain: influence of gender, age at death, postmortem interval, brain pH, agonal state and inter-lobe mRNA variance

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2213675

Markers informative for ancestry demonstrate consistent megabase-length linkage disequilibrium in the African American population

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2213675

Demonstrating stratification in a European American population

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2213675

The stanley foundation brain collection and neuropathology consortium

31 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/17892578

12 December 2020

inferred from PubMed ID database lookup

The patients dying after long terminal phase have acidotic brains; implications for biochemical measurements on autopsy tissue

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/17892578

12 December 2020

inferred from PubMed ID database lookup

Ordered subset analysis in genetic linkage mapping of complex traits

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/17892578

12 December 2020

inferred from PubMed ID database lookup

Identifiers

DOI

10.1186/1471-2164-8-336

1 reference

Dimensions Publication ID

25 July 2017

1 reference

https://scigraph.springernature.com/pub.10.1186/1471-2164-8-336

release_zwnjo76epjeydfakydkas6kwim

9 September 2019

Fatcat ID

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/zwnjo76epjeydfakydkas6kwim

24 November 2022

mapped directly with Wikidata item

PMCID

2213675

1 reference

25 July 2017

1 reference