Transcript annotation in FANTOM3: mouse gene catalog based on physical cDNAs (Q33242821)

24 July 2017

Transcript annotation in FANTOM3: mouse gene catalog based on physical cDNAs (English)

1 reference

24 July 2017

21

John Quackenbush

0 references

Pär G Engström

Pär G Engström

6

0 references

Takeya Kasukawa

Takeya Kasukawa

2

0 references

Shintaro Katayama

Shintaro Katayama

18

0 references

Martin C Frith

Martin Frith

5

0 references

Masayoshi Itoh

Masayoshi Itoh

16

0 references

Christine A Wells

Christine A Wells

28

0 references

Boris Lenhard

Boris Lenhard

7

0 references

David A Hume

David A Hume

32

0 references

Piero Carninci

Piero Carninci

33

0 references

Yoshihide Hayashizaki

34

Yoshihide Hayashizaki

1 reference

24 July 2017

Timothy Ravasi

22

0 references

Julian Gough

4

Julian Gough

1 reference

24 July 2017

11

Carol J Bult

1 reference

24 July 2017

27

Rohan D Teasdale

1 reference

24 July 2017

9

Serge Batalov

1 reference

Mutsumi Kanamori-Katayama

24 July 2017

17

Mutsumi Kanamori-Katayama

1 reference

24 July 2017

13

Alistair R R Forrest

1 reference

24 July 2017

1

Norihiro Maeda

1 reference

24 July 2017

26

Yoichi Takenaka

1 reference

24 July 2017

30

Chikatoshi Kai

1 reference

24 July 2017

10

Kirk W Beisel

1 reference

24 July 2017

3

Rieko Oyama

1 reference

24 July 2017

8

Rajith N Aturaliya

1 reference

24 July 2017

14

Masaaki Furuno

1 reference

24 July 2017

20

Tsugumi Kawashima

1 reference

24 July 2017

Colin F Fletcher

12

1 reference

24 July 2017

David Hill

15

1 reference

24 July 2017

Masaru Katoh

19

1 reference

24 July 2017

Brian Z Ring

23

1 reference

24 July 2017

Kazuhiro Shibata

24

1 reference

24 July 2017

Koji Sugiura

25

1 reference

24 July 2017

Yunxia Zhu

29

1 reference

24 July 2017

Jun Kawai

31

1 reference

24 July 2017

1 April 2006

1 reference

24 July 2017

1 reference

24 July 2017

2

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24 July 2017

4

1 reference

24 July 2017

e62

1 reference

Creative Commons Attribution 4.0 International

24 July 2017

start time

28 April 2006

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

CAGE Basic/Analysis Databases: the CAGE resource for comprehensive promoter analysis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1449903

The transcriptional landscape of the mammalian genome

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1449903

The Universal Protein Resource (UniProt)

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1449903

RNAdb--a comprehensive mammalian noncoding RNA database

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1449903

Nonsense-mediated mRNA decay: splicing, translation and mRNP dynamics

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1449903

Computational gene prediction using multiple sources of evidence

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1449903

Development and evaluation of an automated annotation pipeline and cDNA annotation system

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1449903

CDS annotation in full-length cDNA sequence

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1449903

Targeting a complex transcriptome: the construction of the mouse full-length cDNA encyclopedia

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1449903

Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1449903

The generic genome browser: a building block for a model organism system database

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1449903

BLAT—The BLAST-Like Alignment Tool

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1449903

The Mouse Genome Database (MGD): the model organism database for the laboratory mouse

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1449903

Functional annotation of a full-length mouse cDNA collection

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1449903

Predicting transmembrane protein topology with a hidden Markov model: application to complete genomes

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1449903

The InterPro database, an integrated documentation resource for protein families, domains and functional sites

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1449903

EMBOSS: the European Molecular Biology Open Software Suite

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1449903

CRITICA: coding region identification tool invoking comparative analysis

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1449903

Machine learning approaches for the prediction of signal peptides and other protein sorting signals

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1449903

A perfect message: RNA surveillance and nonsense-mediated decay

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1449903

A computer program for aligning a cDNA sequence with a genomic DNA sequence

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1449903

Comparison of DNA sequences with protein sequences.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1449903

dbEST--database for "expressed sequence tags"

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1449903

Basic local alignment search tool

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1449903

Amino acid translation program for full-length cDNA sequences with frameshift errors.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1449903

10.1371/JOURNAL.PGEN.0020062

31 October 2018

Identifiers

DOI

1 reference

24 July 2017

1 reference

24 July 2017

1 reference