Proteomic analysis of Clostridium thermocellum core metabolism: relative protein expression profiles and growth phase-dependent changes in protein expression. (Q31096352)

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English	Proteomic analysis of Clostridium thermocellum core metabolism: relative protein expression profiles and growth phase-dependent changes in protein expression.	scientific article

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13 February 2020

Proteomic analysis of Clostridium thermocellum core metabolism: relative protein expression profiles and growth phase-dependent changes in protein expression (English)

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Acetivibrio thermocellus

object named as

Clostridium thermocellum

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based on heuristic

inferred from title

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Richard Sparling

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Peter D McQueen

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Oleg V Krokhin

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Vic Spicer

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Peyman Ezzati

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Ravi C Dwivedi

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Dmitry Shamshurin

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David B Levin

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John A Wilkins

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21 September 2012

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BMC Microbiology

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214

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13 February 2020

https://scigraph.springernature.com/pub.10.1186/1471-2180-12-214

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Pyruvate catabolism and hydrogen synthesis pathway genes of Clostridium thermocellum ATCC 27405.

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Clostridium thermocellum ATCC27405 transcriptomic, metabolomic and proteomic profiles after ethanol stress

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Transcriptomic analysis of Clostridium thermocellum ATCC 27405 cellulose fermentation

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Make way for ethanol.

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Physiological characteristics of the extreme thermophile Caldicellulosiruptor saccharolyticus: an efficient hydrogen cell factory

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Clostridium thermocellum cellulosomal genes are regulated by extracytoplasmic polysaccharides via alternative sigma factors.

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The iron-hydrogenase of Thermotoga maritima utilizes ferredoxin and NADH synergistically: a new perspective on anaerobic hydrogen production

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Impact of pretreated Switchgrass and biomass carbohydrates on Clostridium thermocellum ATCC 27405 cellulosome composition: a quantitative proteomic analysis

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Expression of 17 genes in Clostridium thermocellum ATCC 27405 during fermentation of cellulose or cellobiose in continuous culture

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21 June 2018

Regulation of major cellulosomal endoglucanases of Clostridium thermocellum differs from that of a prominent cellulosomal xylanase

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21 June 2018

A hydrogen-sensing multiprotein complex controls aerobic hydrogen metabolism in Ralstonia eutropha

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Cloning and expression of the Clostridium thermocellum L-lactate dehydrogenase gene in Escherichia coli and enzyme characterization

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Regulation of cellulase synthesis in batch and continuous cultures of Clostridium thermocellum

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21 June 2018

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The H(2) sensor of Ralstonia eutropha is a member of the subclass of regulatory [NiFe] hydrogenases

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21 June 2018

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21 June 2018

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21 June 2018

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21 June 2018

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21 June 2018

Ethanol production by thermophilic bacteria: relationship between fermentation product yields of and catabolic enzyme activities in Clostridium thermocellum and Thermoanaerobium brockii.

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21 June 2018

Ethanol production by thermophilic bacteria: metabolic control of end product formation in Thermoanaerobium brockii

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21 June 2018

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21 June 2018

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21 June 2018

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21 June 2018

Purification and characterization of the pyruvate-ferredoxin oxidoreductase from Clostridium acetobutylicum.

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21 June 2018

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21 June 2018

Transcription of Clostridium thermocellum endoglucanase genes celF and celD.

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21 June 2018

Energy conservation in chemotrophic anaerobic bacteria

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21 June 2018

Effect of substrate loading on hydrogen production during anaerobic fermentation by Clostridium thermocellum 27405.

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21 January 2018

Hydrolysis of dilute acid pretreated mixed hardwood and purified microcrystalline cellulose by cell-free broth from Clostridium thermocellum.

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21 January 2018

The H2-sensing complex of Ralstonia eutropha: interaction between a regulatory [NiFe] hydrogenase and a histidine protein kinase.

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21 January 2018

Lactate formation in Caldicellulosiruptor saccharolyticus is regulated by the energy carriers pyrophosphate and ATP.

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21 January 2018

Global view of the Clostridium thermocellum cellulosome revealed by quantitative proteomic analysis

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21 January 2018

Bacterial cellulose hydrolysis in anaerobic environmental subsystems--Clostridium thermocellum and Clostridium stercorarium, thermophilic plant-fiber degraders.

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21 January 2018

The unique set of putative membrane-associated anti-sigma factors in Clostridium thermocellum suggests a novel extracellular carbohydrate-sensing mechanism involved in gene regulation.

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21 January 2018

The Paragon Algorithm, a next generation search engine that uses sequence temperature values and feature probabilities to identify peptides from tandem mass spectra.

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21 January 2018

End-product induced metabolic shifts in Clostridium thermocellum ATCC 27405.

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21 January 2018

Continuous hydrogen production during fermentation of alpha-cellulose by the thermophillic bacterium Clostridium thermocellum

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21 January 2018

Comparison of label-free methods for quantifying human proteins by shotgun proteomics.

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21 January 2018

Co-transcription of the celC gene cluster in Clostridium thermocellum

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21 January 2018

Influence of process conditions on end product formation from Clostridium thermocellum 27405 in solid substrate cultivation on paper pulp sludge

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21 January 2018

Molecular characteristics and transcription of the gene encoding a multifunctional alcohol dehydrogenase in relation to the deactivation of pyruvate formate-lyase in the ruminal bacterium Streptococcus bovis

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21 January 2018

Thermoanaerobacter spp. control ethanol pathway via transcriptional regulation and versatility of key enzymes.

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21 January 2018

Correlation of Relative Abundance Ratios Derived from Peptide Ion Chromatograms and Spectrum Counting for Quantitative Proteomic Analysis Using Stable Isotope Labeling

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21 January 2018

Statistical Analysis of Membrane Proteome Expression Changes inSaccharomycescerevisiae

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21 January 2018

Information-dependent LC-MS/MS acquisition with exclusion lists potentially generated on-the-fly: case study using a whole cell digest of Clostridium thermocellum.

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25 November 2018

Growth phase-dependant enzyme profile of pyruvate catabolism and end-product formation in Clostridium thermocellum ATCC 27405.

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25 November 2018

Carbohydrate Transport by the Anaerobic Thermophile Clostridium thermocellum LQRI.

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25 November 2018

A multisubunit membrane-bound [NiFe] hydrogenase and an NADH-dependent Fe-only hydrogenase in the fermenting bacterium Thermoanaerobacter tengcongensis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3492117

25 November 2018

Metabolic flux in cellulose batch and cellulose-fed continuous cultures of Clostridium cellulolyticum in response to acidic environment

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3492117

25 November 2018

A pathway for the interconversion of hexose and pentose in the parasitic amoeba Entamoeba histolytica

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3492117

25 November 2018

Thermostable, ammonium-activated malic enzyme of Clostridium thermocellum

1 reference

https://pubmed.ncbi.nlm.nih.gov/22994686

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Properties of acetate kinase activity in Clostridium thermocellum cell extracts

1 reference

https://pubmed.ncbi.nlm.nih.gov/22994686

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Two-dimensional separation of peptides using RP-RP-HPLC system with different pH in first and second separation dimensions

1 reference

https://pubmed.ncbi.nlm.nih.gov/22994686

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Induction of lactate production associated with a decrease in NADH cell content enables growth resumption of Clostridium cellulolyticum in batch cultures on cellobiose

1 reference

https://pubmed.ncbi.nlm.nih.gov/22994686

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Formate synthesis by Clostridium thermocellum during anaerobic fermentation

1 reference

https://pubmed.ncbi.nlm.nih.gov/22994686

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Proteomic Analysis by Multidimensional Protein Identification Technology

1 reference

https://pubmed.ncbi.nlm.nih.gov/22994686

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1186/1471-2180-12-214

1 reference

Europe PubMed Central

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22994686%20AND%20SRC:MED&resulttype=core&format=json

13 February 2020

Dimensions Publication ID

0 references

1 reference

Europe PubMed Central

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22994686%20AND%20SRC:MED&resulttype=core&format=json

13 February 2020

1 reference

Europe PubMed Central

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22994686%20AND%20SRC:MED&resulttype=core&format=json

13 February 2020

ResearchGate publication ID

0 references

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