MaizeGDB update: new tools, data and interface for the maize model organism database (Q31001094)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26432828%20AND%20SRC:MED&resulttype=core&format=json

25 February 2020

title

MaizeGDB update: new tools, data and interface for the maize model organism database (English)

1 reference

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25 February 2020

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1 reference

2

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25 February 2020

Kokulapalan Wimalanathan

13

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25 February 2020

Taner Z Sen

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25 February 2020

Carolyn Lawrence-Dill

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object named as

Carolyn J Lawrence-Dill

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25 February 2020

Kyoung Tak Cho

12

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Mary L. Schaeffer

6

object named as

Mary L Schaeffer

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25 February 2020

1

Carson M Andorf

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25 February 2020

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Darwin A Campbell

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25 February 2020

author name string

John L Portwood

3

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25 February 2020

Jack M Gardiner

4

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25 February 2020

Lisa C Harper

5

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25 February 2020

Bremen L Braun

7

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25 February 2020

Abhinav G Vinnakota

9

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25 February 2020

Venktanaga V Sribalusu

10

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25 February 2020

Miranda Huerta

11

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25 February 2020

Jacqueline D Richter

14

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25 February 2020

Emily D Mauch

15

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25 February 2020

Bhavani S Rao

16

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25 February 2020

Scott M Birkett

17

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25 February 2020

language of work or name

English

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publication date

1 October 2015

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25 February 2020

published in

Nucleic Acids Research

1 reference

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25 February 2020

volume

44

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25 February 2020

issue

D1

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25 February 2020

page(s)

D1195-201

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High-resolution genetic mapping of maize pan-genome sequence anchors.

25 February 2020

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A near complete snapshot of the Zea mays seedling transcriptome revealed from ultra-deep sequencing.

21 June 2018

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21 June 2018

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21 June 2018

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21 June 2018

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InsertionMapper: a pipeline tool for the identification of targeted sequences from multidimensional high throughput sequencing data

21 June 2018

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Intraspecific variation of recombination rate in maize

21 June 2018

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Comprehensive genotyping of the USA national maize inbred seed bank.

21 June 2018

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The plant ontology as a tool for comparative plant anatomy and genomic analyses

21 June 2018

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Bridging the phenotypic and genetic data useful for integrated breeding through a data annotation using the Crop Ontology developed by the crop communities of practice

21 June 2018

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Maize HapMap2 identifies extant variation from a genome in flux.

21 June 2018

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Genome-wide analysis of syntenic gene deletion in the grasses

21 June 2018

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A large maize (Zea mays L.) SNP genotyping array: development and germplasm genotyping, and genetic mapping to compare with the B73 reference genome

21 June 2018

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Phytozome: a comparative platform for green plant genomics

21 June 2018

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PLEXdb: gene expression resources for plants and plant pathogens

21 June 2018

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MaizeGDB becomes 'sequence-centric'

21 June 2018

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MaizeGDB: curation and outreach go hand-in-hand

21 June 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4702771

The MaizeGDB Genome Browser tutorial: one example of database outreach to biologists via video

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4702771

Genes identified by visible mutant phenotypes show increased bias toward one of two subgenomes of maize

21 June 2018

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Identification of genes involved in cell wall biogenesis in grasses by differential gene expression profiling of elongating and non-elongating maize internodes

21 June 2018

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Choosing a genome browser for a Model Organism Database: surveying the maize community.

21 June 2018

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A first-generation haplotype map of maize

21 June 2018

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The B73 Maize Genome: Complexity, Diversity, and Dynamics

21 June 2018

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Mu transposon insertion sites and meiotic recombination events co-localize with epigenetic marks for open chromatin across the maize genome

21 June 2018

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Maize and sorghum: genetic resources for bioenergy grasses

21 June 2018

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MaizeDB - a functional genomics perspective

21 June 2018

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PlantGDB: a resource for comparative plant genomics

21 June 2018

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Panzea: an update on new content and features

21 June 2018

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21 June 2018

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Translational genomics for bioenergy production from fuelstock grasses: maize as the model species

21 June 2018

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Sequence-indexed mutations in maize using the UniformMu transposon-tagging population.

21 June 2018

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The Relation of Crossing over to Chromosome Association in Zea-Euchlaena Hybrids.

21 June 2018

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A Correlation of Cytological and Genetical Crossing-Over in Zea Mays

21 June 2018

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Genetic Effects of X-Rays in Maize

21 June 2018

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Using ontologies to describe mouse phenotypes

21 June 2018

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MAPMAN: a user-driven tool to display genomics data sets onto diagrams of metabolic pathways and other biological processes

21 June 2018

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MaizeGDB, the community database for maize genetics and genomics

21 June 2018

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The COG database: an updated version includes eukaryotes

21 June 2018

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ZmDB, an integrated database for maize genome research

21 June 2018

1 reference

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The generic genome browser: a building block for a model organism system database

21 June 2018

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Gene ontology: tool for the unification of biology

21 June 2018

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Gene discovery using the maize genome database ZmDB.

21 June 2018

1 reference

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Development of a core RFLP map in maize using an immortalized F2 population.

21 June 2018

1 reference

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Basic local alignment search tool

21 June 2018

1 reference

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Genetic resources for maize cell wall biology

21 June 2018

1 reference

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Genome-wide prediction of nucleosome occupancy in maize reveals plant chromatin structural features at genes and other elements at multiple scales

21 January 2018

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Genome-wide atlas of transcription during maize development.

21 January 2018

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BAR expressolog identification: expression profile similarity ranking of homologous genes in plant species.

21 January 2018

1 reference

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Gene tagging with engineered Ds elements in maize.

21 January 2018

1 reference

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Methods for generation and analysis of fluorescent protein-tagged maize lines.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKV1007

Automated update, revision, and quality control of the maize genome annotations using MAKER-P improves the B73 RefGen_v3 gene models and identifies new genes

21 January 2018

1 reference

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G-quadruplex (G4) motifs in the maize (Zea mays L.) genome are enriched at specific locations in thousands of genes coupled to energy status, hypoxia, low sugar, and nutrient deprivation

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKV1007

Representation and analysis of molecular networks involving diseases and drugs

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/26432828

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

The early years of maize genetics

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/26432828

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Gramene database: a hub for comparative plant genomics

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/26432828

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1093/NAR/GKV1007

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26432828%20AND%20SRC:MED&resulttype=core&format=json

journals/nar/AndorfCPGHSBCVS16

25 February 2020

DBLP publication ID

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26432828%20AND%20SRC:MED&resulttype=core&format=json

25 February 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26432828%20AND%20SRC:MED&resulttype=core&format=json