DNA damage in the nucleosome core is refractory to repair by human excision nuclease (Q30969773)

12 September 2017

DNA damage in the nucleosome core is refractory to repair by human excision nuclease (English)

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12 September 2017

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R Hara

1

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12 September 2017

J Mo

series ordinal

2

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12 September 2017

A Sancar

series ordinal

3

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12 September 2017

language of work or name

English

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publication date

1 December 2000

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12 September 2017

9

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Molecular and Cellular Biology

inferred from page(s)

published in

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12 September 2017

20

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12 September 2017

9173-9181

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12 September 2017

24

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describes a project that uses

12 September 2017

ImageQuant

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11 June 2022

https://www.ebi.ac.uk/europepmc/webservices/rest/PMC102175/fullTextXML

inferred from PubMed Central ID database lookup

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21 June 2018

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21 June 2018

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The XPV (xeroderma pigmentosum variant) gene encodes human DNA polymerase eta

21 June 2018

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The naturally occurring mutants of DDB are impaired in stimulating nuclear import of the p125 subunit and E2F1-activated transcription

21 June 2018

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Order of assembly of human DNA repair excision nuclease

21 June 2018

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Recognition of nonhybridizing base pairs during nucleotide excision repair of DNA

21 June 2018

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Chromatin rearrangements during nucleotide excision repair

21 June 2018

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Gadd45, a p53-responsive stress protein, modifies DNA accessibility on damaged chromatin

21 June 2018

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Expression of the p48 xeroderma pigmentosum gene is p53-dependent and is involved in global genomic repair

21 June 2018

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RNA polymerase II transcription suppresses nucleosomal modulation of UV-induced (6-4) photoproduct and cyclobutane pyrimidine dimer repair in yeast

21 June 2018

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Requirement of RSF and FACT for transcription of chromatin templates in vitro

21 June 2018

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Alteration of nucleosome structure as a mechanism of transcriptional regulation

21 June 2018

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Xeroderma pigmentosum group C protein complex is the initiator of global genome nucleotide excision repair

21 June 2018

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Nucleosome unfolding during DNA repair in normal and xeroderma pigmentosum (group C) human cells

21 June 2018

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p48 Activates a UV-damaged-DNA binding factor and is defective in xeroderma pigmentosum group E cells that lack binding activity

21 June 2018

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Assembly, subunit composition, and footprint of human DNA repair excision nuclease

21 June 2018

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Relationship of the xeroderma pigmentosum group E DNA repair defect to the chromatin and DNA binding proteins UV-DDB and replication protein A.

21 June 2018

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DDB, a putative DNA repair protein, can function as a transcriptional partner of E2F1.

21 June 2018

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Characterization of reaction intermediates of human excision repair nuclease.

21 June 2018

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Mechanism of open complex and dual incision formation by human nucleotide excision repair factors

21 June 2018

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Formation and processing of UV photoproducts: effects of DNA sequence and chromatin environment

21 June 2018

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RNA polymerase II stalled at a thymine dimer: footprint and effect on excision repair

21 June 2018

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Reconstitution of human excision nuclease with recombinant XPF-ERCC1 complex

21 June 2018

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Recognition and repair of compound DNA lesions (base damage and mismatch) by human mismatch repair and excision repair systems

21 June 2018

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21 June 2018

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21 June 2018

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Relationships between DNA repair and transcription

21 June 2018

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Chromatin assembly coupled to DNA repair: a new role for chromatin assembly factor I.

21 June 2018

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Mutations specific to the xeroderma pigmentosum group E Ddb- phenotype

21 June 2018

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Overproduction, purification, and characterization of the XPC subunit of the human DNA repair excision nuclease

21 June 2018

1 reference

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An affinity of human replication protein A for ultraviolet-damaged DNA.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=102175

Functional complementation of xeroderma pigmentosum complementation group E by replication protein A in an in vitro system

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=102175

Replication protein A confers structure-specific endonuclease activities to the XPF-ERCC1 and XPG subunits of human DNA repair excision nuclease

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=102175

Reaction mechanism of human DNA repair excision nuclease

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=102175

Molecular mechanism of transcription-repair coupling.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=102175

Characterization of a human DNA damage binding protein implicated in xeroderma pigmentosum E

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=102175

Preferential binding of the xeroderma pigmentosum group A complementing protein to damaged DNA.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=102175

Transcript cleavage by RNA polymerase II arrested by a cyclobutane pyrimidine dimer in the DNA template

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=102175

Mechanisms of transcription-repair coupling and mutation frequency decline

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=102175

Excision repair in man and the molecular basis of xeroderma pigmentosum syndrome

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=102175

Reconstitution of human DNA repair excision nuclease in a highly defined system

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=102175

Transcription-coupled repair and human disease

21 June 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=102175

Reconstitution of yeast nucleotide excision repair with purified Rad proteins, replication protein A, and transcription factor TFIIH.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=102175

DNA-dependent transcription of adenovirus genes in a soluble whole-cell extract.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=102175

Excision repair of pyrimidine dimers from simian virus 40 minichromosomes in vitro

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=102175

Preferential DNA Repair in Human Cells

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=102175

DNA repair in an active gene: removal of pyrimidine dimers from the DHFR gene of CHO cells is much more efficient than in the genome overall.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=102175

Selective removal of transcription-blocking DNA damage from the transcribed strand of the mammalian DHFR gene

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=102175

Xeroderma pigmentosum group E cells lack a nuclear factor that binds to damaged DNA

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=102175

Repair of pyrimidine dimer ultraviolet light photoproducts by human cell extracts

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=102175

Induction of the Escherichia coli lactose operon selectively increases repair of its transcribed DNA strand

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=102175

Purification and characterization of CAF-I, a human cell factor required for chromatin assembly during DNA replication in vitro

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=102175

The genetic defect in Cockayne syndrome is associated with a defect in repair of UV-induced DNA damage in transcriptionally active DNA.

21 June 2018

1 reference

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Nonrandom induction of pyrimidine-pyrimidone (6-4) photoproducts in ultraviolet-irradiated human chromatin

21 June 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=102175

Substrate overlap and functional competition between human nucleotide excision repair and Escherichia coli photolyase and (a)BC excision nuclease

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=102175

Site-specific DNA repair at the nucleosome level in a yeast minichromosome.

21 June 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=102175

UV damage-specific DNA-binding protein in xeroderma pigmentosum complementation group E.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=102175

Nucleotide excision repair of DNA by human cell extracts is suppressed in reconstituted nucleosomes

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=102175

Histone contributions to the structure of DNA in the nucleosome

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=102175

Xeroderma pigmentosum complementation group C cells remove pyrimidine dimers selectively from the transcribed strand of active genes

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=102175

Biochemical heterogeneity in xeroderma pigmentosum complementation group E

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=102175

Human nucleotide excision nuclease removes thymine dimers from DNA by incising the 22nd phosphodiester bond 5' and the 6th phosphodiester bond 3' to the photodimer

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=102175

Comparative analysis of binding of human damaged DNA-binding protein (XPE) and Escherichia coli damage recognition protein (UvrA) to the major ultraviolet photoproducts: T[c,s]T, T[t,s]T, T[6-4]T, and T[Dewar]T.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=102175

Cell-free repair of UV-damaged simian virus 40 chromosomes in human cell extracts. I. Development of a cell-free system detecting excision repair of UV-irradiated SV40 chromosomes

25 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=102175

A positive role for histone acetylation in transcription factor access to nucleosomal DNA

25 November 2018

1 reference

12 December 2020

Preparation and characterization of a set of deoxyoligonucleotide 49-mers containing site-specific cis-syn, trans-syn-I, (6-4), and Dewar photoproducts of thymidylyl(3'-->5')-thymidine

1 reference

12 December 2020

Repair of UV-induced (6-4) photoproducts in nucleosome core DNA

1 reference

12 December 2020

Chromatin structure of the yeast URA3 gene at high resolution provides insight into structure and positioning of nucleosomes in the chromosomal context

1 reference

12 December 2020

(6-4)Photoproducts are removed from the DNA of UV-irradiated mammalian cells more efficiently than cyclobutane pyrimidine dimers

1 reference

12 December 2020

DNA repair within nucleosome cores of UV-irradiated human cells

1 reference

12 December 2020

10.1128/MCB.20.24.9173-9181.2000

Identifiers

DOI

1 reference

12 September 2017

1 reference

12 September 2017

1 reference