Emergence of diverse biochemical activities in evolutionarily conserved structural scaffolds of proteins (Q30883445)

27 June 2017

1 reference

title

Emergence of diverse biochemical activities in evolutionarily conserved structural scaffolds of proteins (English)

1 reference

27 June 2017

1

Vivek Anantharaman

0 references

Aravind L Iyer

object named as

L Aravind

series ordinal

2

0 references

Eugene Koonin

series ordinal

3

object named as

Eugene V Koonin

1 reference

27 June 2017

1 February 2003

1 reference

Current Opinion in Chemical Biology

27 June 2017

1 reference

27 June 2017

7

1 reference

27 June 2017

12-20

1 reference

27 June 2017

1

1 reference

Molecules as documents of evolutionary history

27 June 2017

1 reference

https://api.crossref.org/works/10.1016%2FS1367-5931%2802%2900018-2

7 January 2021

Regulatory potential, phyletic distribution and evolution of ancient, intracellular small-molecule-binding domains.

1 reference

https://api.crossref.org/works/10.1016%2FS1367-5931%2802%2900018-2

7 January 2021

Toprim--a conserved catalytic domain in type IA and II topoisomerases, DnaG-type primases, OLD family nucleases and RecR proteins

1 reference

https://api.crossref.org/works/10.1016%2FS1367-5931%2802%2900018-2

7 January 2021

A TOPRIM domain in the crystal structure of the catalytic core of Escherichia coli primase confirms a structural link to DNA topoisomerases

1 reference

https://api.crossref.org/works/10.1016%2FS1367-5931%2802%2900018-2

7 January 2021

Structure of the RNA polymerase domain of E. coli primase

1 reference

https://api.crossref.org/works/10.1016%2FS1367-5931%2802%2900018-2

7 January 2021

The evolution of alpha/beta barrel enzymes

1 reference

https://api.crossref.org/works/10.1016%2FS1367-5931%2802%2900018-2

7 January 2021

One fold with many functions: the evolutionary relationships between TIM barrel families based on their sequences, structures and functions

1 reference

https://api.crossref.org/works/10.1016%2FS1367-5931%2802%2900018-2

7 January 2021

Homology among (betaalpha)(8) barrels: implications for the evolution of metabolic pathways

1 reference

https://api.crossref.org/works/10.1016%2FS1367-5931%2802%2900018-2

7 January 2021

Analysis of catalytic residues in enzyme active sites.

1 reference

https://api.crossref.org/works/10.1016%2FS1367-5931%2802%2900018-2

7 January 2021

Plasticity of enzyme active sites

1 reference

https://api.crossref.org/works/10.1016%2FS1367-5931%2802%2900018-2

7 January 2021

SCOP database in 2002: refinements accommodate structural genomics

1 reference

https://api.crossref.org/works/10.1016%2FS1367-5931%2802%2900018-2

7 January 2021

Gene3D: structural assignment for whole genes and genomes using the CATH domain structure database

1 reference

https://api.crossref.org/works/10.1016%2FS1367-5931%2802%2900018-2

7 January 2021

Monophyly of class I aminoacyl tRNA synthetase, USPA, ETFP, photolyase, and PP-ATPase nucleotide-binding domains: implications for protein evolution in the RNA.

1 reference

https://api.crossref.org/works/10.1016%2FS1367-5931%2802%2900018-2

7 January 2021

Comparative genomics and evolution of proteins involved in RNA metabolism

1 reference

https://api.crossref.org/works/10.1016%2FS1367-5931%2802%2900018-2

7 January 2021

Advances in structural genomics

1 reference

https://api.crossref.org/works/10.1016%2FS1367-5931%2802%2900018-2

7 January 2021

Protein fold recognition using sequence profiles and its application in structural genomics

1 reference

https://api.crossref.org/works/10.1016%2FS1367-5931%2802%2900018-2

7 January 2021

Structural genomics analysis: characteristics of atypical, common, and horizontally transferred folds.

1 reference

https://api.crossref.org/works/10.1016%2FS1367-5931%2802%2900018-2

7 January 2021

The catalytic domain of the P-type ATPase has the haloacid dehalogenase fold

1 reference

https://api.crossref.org/works/10.1016%2FS1367-5931%2802%2900018-2

7 January 2021

SURVEY AND SUMMARY: holliday junction resolvases and related nucleases: identification of new families, phyletic distribution and evolutionary trajectories

1 reference

https://api.crossref.org/works/10.1016%2FS1367-5931%2802%2900018-2

7 January 2021

Evolution of protein kinase signaling from yeast to man

1 reference

https://api.crossref.org/works/10.1016%2FS1367-5931%2802%2900018-2

7 January 2021

Lineage-specific gene expansions in bacterial and archaeal genomes

1 reference

https://api.crossref.org/works/10.1016%2FS1367-5931%2802%2900018-2

7 January 2021

Automatic clustering of orthologs and in-paralogs from pairwise species comparisons

1 reference

https://api.crossref.org/works/10.1016%2FS1367-5931%2802%2900018-2

7 January 2021

The role of lineage-specific gene family expansion in the evolution of eukaryotes

1 reference

https://api.crossref.org/works/10.1016%2FS1367-5931%2802%2900018-2

7 January 2021

Evolution of functional diversity in the cupin superfamily.

1 reference

https://api.crossref.org/works/10.1016%2FS1367-5931%2802%2900018-2

7 January 2021

Novel sequences propel familiar folds

1 reference

https://api.crossref.org/works/10.1016%2FS1367-5931%2802%2900018-2

7 January 2021

The structure of Neurospora crassa 3-carboxy-cis,cis-muconate lactonizing enzyme, a beta propeller cycloisomerase

1 reference

https://api.crossref.org/works/10.1016%2FS1367-5931%2802%2900018-2

7 January 2021

Structure at 1.9 A resolution of a quinohemoprotein alcohol dehydrogenase from Pseudomonas putida HK5

1 reference

https://api.crossref.org/works/10.1016%2FS1367-5931%2802%2900018-2

7 January 2021

Cellvibrio japonicus alpha-L-arabinanase 43A has a novel five-blade beta-propeller fold

1 reference

https://api.crossref.org/works/10.1016%2FS1367-5931%2802%2900018-2

7 January 2021

The DNA-repair protein AlkB, EGL-9, and leprecan define new families of 2-oxoglutarate- and iron-dependent dioxygenases

1 reference

https://api.crossref.org/works/10.1016%2FS1367-5931%2802%2900018-2

7 January 2021

Germin is a manganese containing homohexamer with oxalate oxidase and superoxide dismutase activities

1 reference

https://api.crossref.org/works/10.1016%2FS1367-5931%2802%2900018-2

7 January 2021

Structure of oxalate decarboxylase from Bacillus subtilis at 1.75 A resolution

1 reference

https://api.crossref.org/works/10.1016%2FS1367-5931%2802%2900018-2

7 January 2021

AlkB-mediated oxidative demethylation reverses DNA damage in Escherichia coli

1 reference

https://api.crossref.org/works/10.1016%2FS1367-5931%2802%2900018-2

7 January 2021

Oxidative demethylation by Escherichia coli AlkB directly reverts DNA base damage

1 reference

https://api.crossref.org/works/10.1016%2FS1367-5931%2802%2900018-2

7 January 2021

JmjC: cupin metalloenzyme-like domains in jumonji, hairless and phospholipase A2β

1 reference

https://api.crossref.org/works/10.1016%2FS1367-5931%2802%2900018-2

7 January 2021

Gleaning non-trivial structural, functional and evolutionary information about proteins by iterative database searches

1 reference

https://api.crossref.org/works/10.1016%2FS1367-5931%2802%2900018-2

7 January 2021

The ACT domain family.

1 reference

https://api.crossref.org/works/10.1016%2FS1367-5931%2802%2900018-2

7 January 2021

Crystal structure of muconolactone isomerase at 3.3 A resolution

1 reference

https://api.crossref.org/works/10.1016%2FS1367-5931%2802%2900018-2

7 January 2021

The presence of a hydrogen bond between asparagine 485 and the pi system of FAD modulates the redox potential in the reaction catalyzed by cholesterol oxidase

1 reference

https://api.crossref.org/works/10.1016%2FS1367-5931%2802%2900018-2

7 January 2021

Crystal structure of human nucleoside diphosphate kinase A, a metastasis suppressor

1 reference

https://api.crossref.org/works/10.1016%2FS1367-5931%2802%2900018-2

7 January 2021

Crystal structure and anion binding in the prokaryotic hydrogenase maturation factor HypF acylphosphatase-like domain

1 reference

https://api.crossref.org/works/10.1016%2FS1367-5931%2802%2900018-2

7 January 2021

Crystal structure of common type acylphosphatase from bovine testis

1 reference

https://api.crossref.org/works/10.1016%2FS1367-5931%2802%2900018-2

7 January 2021

Cocrystal structure of a tRNA Psi55 pseudouridine synthase: nucleotide flipping by an RNA-modifying enzyme

1 reference

https://api.crossref.org/works/10.1016%2FS1367-5931%2802%2900018-2

7 January 2021

Trends in protein evolution inferred from sequence and structure analysis.

1 reference

https://api.crossref.org/works/10.1016%2FS1367-5931%2802%2900018-2

7 January 2021

Enzyme mechanism and catalytic property of beta propeller phytase

1 reference

https://api.crossref.org/works/10.1016%2FS1367-5931%2802%2900018-2

7 January 2021

Crystal structure of diisopropylfluorophosphatase from Loligo vulgaris

1 reference

https://api.crossref.org/works/10.1016%2FS1367-5931%2802%2900018-2

7 January 2021

Crystal structure of estrogen sulphotransferase

1 reference

https://api.crossref.org/works/10.1016%2FS1367-5931%2802%2900018-2

7 January 2021

Classification and evolution of P-loop GTPases and related ATPases

1 reference

https://api.crossref.org/works/10.1016%2FS1367-5931%2802%2900018-2

7 January 2021

A superfamily of ATPases with diverse functions containing either classical or deviant ATP-binding motif

1 reference

https://api.crossref.org/works/10.1016%2FS1367-5931%2802%2900018-2

7 January 2021

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

1 reference

https://api.crossref.org/works/10.1016%2FS1367-5931%2802%2900018-2

7 January 2021

IMPALA: matching a protein sequence against a collection of PSI-BLAST-constructed position-specific score matrices

1 reference

https://api.crossref.org/works/10.1016%2FS1367-5931%2802%2900018-2

7 January 2021

10.1016/S1367-5931(02)00018-2

Identifiers

DOI

1 reference

27 June 2017

1 reference

PubMed ID

12547421