The SUPERFAMILY 1.75 database in 2014: a doubling of data (Q30870918)

14 October 2017

The SUPERFAMILY 1.75 database in 2014: a doubling of data (English)

1 reference

14 October 2017

0 references

Adam J Sardar

6

0 references

Jan Zaucha

Jan Zaucha

7

0 references

Matt Oates

Matt E Oates

1

0 references

Hai Fang

Hai Fang

9

0 references

Julian Gough

10

Julian Gough

1 reference

14 October 2017

5

Owen J L Rackham

1 reference

14 October 2017

Jonathan Stahlhacke

2

1 reference

14 October 2017

Dimitrios V Vavoulis

3

1 reference

14 October 2017

Ben Smithers

4

1 reference

14 October 2017

Natalie Thurlby

8

1 reference

14 October 2017

language of work or name

English

0 references

publication date

20 November 2014

1 reference

14 October 2017

Nucleic Acids Research

1 reference

14 October 2017

43

1 reference

14 October 2017

Database issue

1 reference

14 October 2017

D227-33

1 reference

Creative Commons Attribution 4.0 International

14 October 2017

start time

9 November 2016

1 reference

April 2022 Public Data File from Crossref

0 references

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4383889

SCOP2 prototype: a new approach to protein structure mining

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4383889

RefSeq: an update on mammalian reference sequences

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4383889

Activities at the Universal Protein Resource (UniProt)

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4383889

A daily-updated tree of (sequenced) life as a reference for genome research.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4383889

A domain-centric solution to functional genomics via dcGO Predictor

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4383889

A large-scale evaluation of computational protein function prediction

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4383889

Genome3D: a UK collaborative project to annotate genomic sequences with predicted 3D structures based on SCOP and CATH domains

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4383889

D²P²: database of disordered protein predictions

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4383889

New functional families (FunFams) in CATH to improve the mapping of conserved functional sites to 3D structures

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4383889

DcGO: database of domain-centric ontologies on functions, phenotypes, diseases and more

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4383889

Evolutionarily consistent families in SCOP: sequence, structure and function

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4383889

Phytozome: a comparative platform for green plant genomics

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4383889

SUPERFAMILY 1.75 including a domain-centric gene ontology method

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4383889

TreeVector: scalable, interactive, phylogenetic trees for the web

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4383889

SUPERFAMILY--sophisticated comparative genomics, data mining, visualization and phylogeny

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4383889

The SUPERFAMILY database in 2007: families and functions

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4383889

Genomic scale sub-family assignment of protein domains

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4383889

The SUPERFAMILY database in 2004: additions and improvements

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4383889

Assignment of homology to genome sequences using a library of hidden Markov models that represent all proteins of known structure

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4383889

SCOP: a structural classification of proteins database for the investigation of sequences and structures

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4383889

Activities at the Universal Protein Resource (UniProt)

21 June 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKU1041

Phylogenetic Analysis Under Dollo's Law

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKU1041

Convergent evolution of domain architectures (is rare).

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKU1041

Comparative Protein Structure Modeling Using MODELLER

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKU1041

21 January 2018

Identifiers

DOI

10.1093/NAR/GKU1041

1 reference

journals/nar/OatesSVSRSZTFG15

14 October 2017

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference

14 October 2017

1 reference