Cryo-EM structure of Hepatitis C virus IRES bound to the human ribosome at 3.9-Å resolution (Q30658546)

10 August 2017

Cryo-EM structure of Hepatitis C virus IRES bound to the human ribosome at 3.9-Å resolution (English)

1 reference

cryogenic electron microscopy

10 August 2017

0 references

1 reference

1 reference

5

Nenad Ban

1 reference

10 August 2017

2

Daniel Boehringer

1 reference

10 August 2017

Nick Quade

1

1 reference

10 August 2017

Marc Leibundgut

series ordinal

3

1 reference

10 August 2017

Joop van den Heuvel

series ordinal

4

1 reference

10 August 2017

language of work or name

English

0 references

publication date

8 July 2015

1 reference

10 August 2017

Nature Communications

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10 August 2017

6

1 reference

10 August 2017

7646

1 reference

Creative Commons Attribution 4.0 International

10 August 2017

start time

8 July 2015

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

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20 June 2018

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Base pairing between hepatitis C virus RNA and 18S rRNA is required for IRES-dependent translation initiation in vivo

20 June 2018

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20 June 2018

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20 June 2018

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Structure of the mammalian 80S initiation complex with initiation factor 5B on HCV-IRES RNA

20 June 2018

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Structure of the Mammalian Ribosome-Sec61 Complex to 3.4 Å Resolution

20 June 2018

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Initiation of Translation by Cricket Paralysis Virus IRES Requires Its Translocation in the Ribosome

20 June 2018

1 reference

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The scanning mechanism of eukaryotic translation initiation

20 June 2018

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Purification, characterization and crystallization of the human 80S ribosome

20 June 2018

1 reference

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Quantifying the local resolution of cryo-EM density maps

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4510694

Hepatitis-C-virus-like internal ribosome entry sites displace eIF3 to gain access to the 40S subunit

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4510694

The crystal structure of the eukaryotic 40S ribosomal subunit in complex with eIF1 and eIF1A

20 June 2018

1 reference

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Structure of the mammalian ribosomal 43S preinitiation complex bound to the scanning factor DHX29

20 June 2018

1 reference

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Electron counting and beam-induced motion correction enable near-atomic-resolution single-particle cryo-EM.

20 June 2018

1 reference

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HCV IRES manipulates the ribosome to promote the switch from translation initiation to elongation

20 June 2018

1 reference

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RELION: implementation of a Bayesian approach to cryo-EM structure determination

20 June 2018

1 reference

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Targeting ribosome assembly on the HCV RNA using a small RNA molecule

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4510694

Prevention of overfitting in cryo-EM structure determination

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4510694

Structure of a hepatitis C virus RNA domain in complex with a translation inhibitor reveals a binding mode reminiscent of riboswitches

20 June 2018

1 reference

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The structure of the eukaryotic ribosome at 3.0 Å resolution

20 June 2018

1 reference

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Crystal structure of the HCV IRES central domain reveals strategy for start-codon positioning

20 June 2018

1 reference

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HCV IRES domain IIb affects the configuration of coding RNA in the 40S subunit's decoding groove

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4510694

The HCV IRES pseudoknot positions the initiation codon on the 40S ribosomal subunit

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4510694

Features and development of Coot

20 June 2018

1 reference

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PHENIX: a comprehensive Python-based system for macromolecular structure solution

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4510694

RPS25 is essential for translation initiation by the Dicistroviridae and hepatitis C viral IRESs

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4510694

Conserved functional domains and a novel tertiary interaction near the pseudoknot drive translational activity of hepatitis C virus and hepatitis C virus-like internal ribosome entry sites

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4510694

The importance of inter- and intramolecular base pairing for translation reinitiation on a eukaryotic bicistronic mRNA.

20 June 2018

1 reference

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An improved cryogen for plunge freezing

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4510694

A Distinct Group of Hepacivirus/Pestivirus-Like Internal Ribosomal Entry Sites in Members of Diverse Picornavirus Genera: Evidence for Modular Exchange of Functional Noncoding RNA Elements by Recombination

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4510694

HCV and CSFV IRES domain II mediate eIF2 release during 80S ribosome assembly

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4510694

Interactive electron-density map interpretation: from INTER to O.

20 June 2018

1 reference

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20 June 2018

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Structure of HCV IRES domain II determined by NMR

20 June 2018

1 reference

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The dynamic nature of the four-way junction of the hepatitis C virus IRES.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4510694

Accurate determination of local defocus and specimen tilt in electron microscopy

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4510694

Crystal structure of an RNA tertiary domain essential to HCV IRES-mediated translation initiation

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4510694

Mutational analysis of the apical region of domain II of the HCV IRES.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4510694

Crystal structure of the ribosome at 5.5 A resolution

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4510694

Hepatitis C virus IRES RNA-induced changes in the conformation of the 40s ribosomal subunit

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4510694

Mechanism of ribosome recruitment by hepatitis C IRES RNA

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4510694

Structures of two RNA domains essential for hepatitis C virus internal ribosome entry site function

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4510694

EMAN: semiautomated software for high-resolution single-particle reconstructions

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4510694

A prokaryotic-like mode of cytoplasmic eukaryotic ribosome binding to the initiation codon during internal translation initiation of hepatitis C and classical swine fever virus RNAs

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4510694

Secondary structure of the 5' nontranslated regions of hepatitis C virus and pestivirus genomic RNAs

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4510694

Introduction: a smouldering public-health crisis

20 June 2018

1 reference

https://api.crossref.org/works/10.1038%2FNCOMMS8646

The pathway of HCV IRES-mediated translation initiation

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNCOMMS8646

Structure of the hepatitis C virus IRES bound to the human 80S ribosome: remodeling of the HCV IRES.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNCOMMS8646

Mutational and structural analysis of stem-loop IIIC of the hepatitis C virus and GB virus B internal ribosome entry sites

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNCOMMS8646

Mutational analysis of a conserved tetraloop in the 5' untranslated region of hepatitis C virus identifies a novel RNA element essential for the internal ribosome entry site function.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNCOMMS8646

Culture of HEK293-EBNA1 Cells for Production of Recombinant Proteins

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/26155016

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1038/NCOMMS8646

1 reference

Dimensions Publication ID

10 August 2017

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1 reference

10 August 2017

1 reference