HIV-1 Recruits UPF1 but Excludes UPF2 to Promote Nucleocytoplasmic Export of the Genomic RNA. (Q30488459)

14 August 2017

HIV-1 Recruits UPF1 but Excludes UPF2 to Promote Nucleocytoplasmic Export of the Genomic RNA. (English)

1 reference

14 August 2017

8

Niels H Gehring

1 reference

14 August 2017

Shringar Rao

3

1 reference

ORCID Public Data File 2021

Andreas E Kulozik

7

object named as

Andreas E Kulozik

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14 August 2017

Lara Ajamian

1

1 reference

14 August 2017

Karen Abel

2

1 reference

14 August 2017

Kishanda Vyboh

4

1 reference

14 August 2017

Francisco García-de-Gracia

5

1 reference

14 August 2017

Ricardo Soto-Rifo

6

1 reference

14 August 2017

Andrew J Mouland

9

1 reference

14 August 2017

20 October 2015

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14 August 2017

1 reference

14 August 2017

5

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14 August 2017

4

1 reference

14 August 2017

2808-2839

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Creative Commons Attribution 4.0 International

14 August 2017

start time

20 October 2015

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April 2022 Public Data File from Crossref

copyright status

copyrighted

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describes a project that uses

ImageJ

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11 June 2022

https://www.ebi.ac.uk/europepmc/webservices/rest/PMC4693258/fullTextXML

based on heuristic

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cites work

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20 June 2018

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20 June 2018

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20 June 2018

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20 June 2018

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20 June 2018

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The human T-lymphotropic virus type 1 tax protein inhibits nonsense-mediated mRNA decay by interacting with INT6/EIF3E and UPF1.

20 June 2018

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20 June 2018

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20 June 2018

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20 June 2018

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20 June 2018

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N- and C-terminal Upf1 phosphorylations create binding platforms for SMG-6 and SMG-5:SMG-7 during NMD

20 June 2018

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RNA homeostasis governed by cell type-specific and branched feedback loops acting on NMD.

20 June 2018

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Human UPF1 interacts with TPP1 and telomerase and sustains telomere leading-strand replication

20 June 2018

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Nuclear export dynamics of RNA-protein complexes.

20 June 2018

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Characterization of the HIV-1 RNA associated proteome identifies Matrin 3 as a nuclear cofactor of Rev function

20 June 2018

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20 June 2018

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Identification of a microRNA that activates gene expression by repressing nonsense-mediated RNA decay

20 June 2018

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HIV-1 remodels the nuclear pore complex

20 June 2018

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Molecular mechanisms for the RNA-dependent ATPase activity of Upf1 and its regulation by Upf2

20 June 2018

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Upf1 senses 3'UTR length to potentiate mRNA decay

20 June 2018

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HIV Rev response element (RRE) directs assembly of the Rev homooligomer into discrete asymmetric complexes

20 June 2018

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Insights into the recruitment of the NMD machinery from the crystal structure of a core EJC-UPF3b complex

20 June 2018

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Live cell visualization of the interactions between HIV-1 Gag and the cellular RNA-binding protein Staufen1

20 June 2018

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Implications of the HIV-1 Rev dimer structure at 3.2 A resolution for multimeric binding to the Rev response element

20 June 2018

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Novel Staufen1 ribonucleoproteins prevent formation of stress granules but favour encapsidation of HIV-1 genomic RNA.

20 June 2018

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Gene expression networks: competing mRNA decay pathways in mammalian cells

20 June 2018

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Nonsense-mediated mRNA decay in human cells: mechanistic insights, functions beyond quality control and the double-life of NMD factors

20 June 2018

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Human immunodeficiency virus type 1 (HIV-1) induces the cytoplasmic retention of heterogeneous nuclear ribonucleoprotein A1 by disrupting nuclear import: implications for HIV-1 gene expression

20 June 2018

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Insulin-like growth factor II mRNA binding protein 1 modulates Rev-dependent human immunodeficiency virus type 1 RNA expression

20 June 2018

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Aberrant mRNA transcripts and the nonsense-mediated decay proteins UPF2 and UPF3 are enriched in the Arabidopsis nucleolus.

20 June 2018

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Alignment of multiple protein structures based on sequence and structure features.

20 June 2018

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Inhibition of Nonsense-mediated mRNA Decay by the Natural Product Pateamine A through Eukaryotic Initiation Factor 4AIII

20 June 2018

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Unusual bipartite mode of interaction between the nonsense-mediated decay factors, UPF1 and UPF2

20 June 2018

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A UPF3-mediated regulatory switch that maintains RNA surveillance

20 June 2018

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Execution of nonsense-mediated mRNA decay: what defines a substrate?

20 June 2018

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Intracellular transport of human immunodeficiency virus type 1 genomic RNA and viral production are dependent on dynein motor function and late endosome positioning

20 June 2018

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Long 3'-UTRs target wild-type mRNAs for nonsense-mediated mRNA decay in Saccharomyces cerevisiae.

20 June 2018

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Nonsense-mediated mRNA decay (NMD) mechanisms

20 June 2018

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Cellular proteins and HIV-1 Rev function

20 June 2018

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SMD and NMD are competitive pathways that contribute to myogenesis: effects on PAX3 and myogenin mRNAs

20 June 2018

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The multiple lives of NMD factors: balancing roles in gene and genome regulation

20 June 2018

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Imaging the biogenesis of individual HIV-1 virions in live cells

20 June 2018

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Unexpected roles for UPF1 in HIV-1 RNA metabolism and translation

20 June 2018

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The editing enzyme ADAR1 and the mRNA surveillance protein hUpf1 interact in the cell nucleus

20 June 2018

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Nucleocytoplasmic transport of proteins

20 June 2018

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Interactions between UPF1, eRFs, PABP and the exon junction complex suggest an integrated model for mammalian NMD pathways

20 June 2018

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NMD factors UPF2 and UPF3 bridge UPF1 to the exon junction complex and stimulate its RNA helicase activity

20 June 2018

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An anti-apoptotic protein, Hax-1, inhibits the HIV-1 rev function by altering its sub-cellular localization

20 June 2018

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Crystal structure of conserved domains 1 and 2 of the human DEAD-box helicase DDX3X in complex with the mononucleotide AMP

20 June 2018

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The host protein Staufen1 participates in human immunodeficiency virus type 1 assembly in live cells by influencing pr55Gag multimerization

20 June 2018

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Trafficking of HIV-1 RNA is mediated by heterogeneous nuclear ribonucleoprotein A2 expression and impacts on viral assembly

20 June 2018

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Crystal structure of the UPF2-interacting domain of nonsense-mediated mRNA decay factor UPF1.

20 June 2018

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Nuclear mRNA degradation pathway(s) are implicated in Xist regulation and X chromosome inactivation

20 June 2018

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Functions of hUpf3a and hUpf3b in nonsense-mediated mRNA decay and translation

20 June 2018

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The human RNA surveillance factor UPF1 is required for S phase progression and genome stability

20 June 2018

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Ataxia-telangiectasia-mutated (ATM) protein can enhance human immunodeficiency virus type 1 replication by stimulating Rev function

20 June 2018

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Binding of a novel SMG-1-Upf1-eRF1-eRF3 complex (SURF) to the exon junction complex triggers Upf1 phosphorylation and nonsense-mediated mRNA decay

20 June 2018

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Exon-junction complex components specify distinct routes of nonsense-mediated mRNA decay with differential cofactor requirements

20 June 2018

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Sam68 is absolutely required for Rev function and HIV-1 production

20 June 2018

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Mammalian Staufen1 recruits Upf1 to specific mRNA 3'UTRs so as to elicit mRNA decay

20 June 2018

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Within you, without you: HIV-1 Rev and RNA export

20 June 2018

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Requirement of DDX3 DEAD box RNA helicase for HIV-1 Rev-RRE export function

20 June 2018

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A late role for the association of hnRNP A2 with the HIV-1 hnRNP A2 response elements in genomic RNA, Gag, and Vpr localization

20 June 2018

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The mRNA surveillance protein hSMG-1 functions in genotoxic stress response pathways in mammalian cells

20 June 2018

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Phosphorylation of hUPF1 induces formation of mRNA surveillance complexes containing hSMG-5 and hSMG-7

20 June 2018

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Nuclear mRNA export: insights from virology

20 June 2018

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Y14 and hUpf3b form an NMD-activating complex

20 June 2018

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20 June 2018

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Separable roles for rent1/hUpf1 in altered splicing and decay of nonsense transcripts

20 June 2018

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The exon junction complex is detected on CBP80-bound but not eIF4E-bound mRNA in mammalian cells: dynamics of mRNP remodeling

20 June 2018

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Cofactor requirements for nuclear export of Rev response element (RRE)- and constitutive transport element (CTE)-containing retroviral RNAs. An unexpected role for actin

20 June 2018

1 reference

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Identification and characterization of human orthologues to Saccharomyces cerevisiae Upf2 protein and Upf3 protein (Caenorhabditis elegans SMG-4)

20 June 2018

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Novel Upf2p orthologues suggest a functional link between translation initiation and nonsense surveillance complexes

20 June 2018

1 reference

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Characterization of the biochemical properties of the human Upf1 gene product that is involved in nonsense-mediated mRNA decay

20 June 2018

1 reference

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Rev protein and its cellular partners

20 June 2018

1 reference

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Sam68, RNA helicase A and Tap cooperate in the post-transcriptional regulation of human immunodeficiency virus and type D retroviral mRNA

20 June 2018

1 reference

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The double-stranded RNA-binding protein Staufen is incorporated in human immunodeficiency virus type 1: evidence for a role in genomic RNA encapsidation

20 June 2018

1 reference

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Nucleoporins nup98 and nup214 participate in nuclear export of human immunodeficiency virus type 1 Rev

20 June 2018

1 reference

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CRM1 is an export receptor for leucine-rich nuclear export signals

20 June 2018

1 reference

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Cloning and characterization of HUPF1, a human homolog of the Saccharomyces cerevisiae nonsense mRNA-reducing UPF1 protein

20 June 2018

1 reference

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Alternative splicing of human immunodeficiency virus type 1 mRNA modulates viral protein expression, replication, and infectivity.

20 June 2018

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The HIV-1 rev trans-activator acts through a structured target sequence to activate nuclear export of unspliced viral mRNA

20 June 2018

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Macrophage-tropic human immunodeficiency virus isolates from different patients exhibit unusual V3 envelope sequence homogeneity in comparison with T-cell-tropic isolates: definition of critical amino acids involved in cell tropism

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4693258

Overexpression of TAP/p15 heterodimers bypasses nuclear retention and stimulates nuclear mRNA export.

20 June 2018

1 reference

https://api.crossref.org/works/10.3390%2FBIOM5042808

Viral interference with host mRNA surveillance, the nonsense-mediated mRNA decay (NMD) pathway, through a new function of HTLV-1 Rex: implications for retroviral replication

21 January 2018

1 reference

https://api.crossref.org/works/10.3390%2FBIOM5042808

Live-cell assay for simultaneous monitoring of expression and interaction of proteins.

21 January 2018

1 reference

https://api.crossref.org/works/10.3390%2FBIOM5042808

Computational redesign of protein-protein interaction specificity.

21 January 2018

1 reference

https://api.crossref.org/works/10.3390%2FBIOM5042808

Upf1p, a highly conserved protein required for nonsense-mediated mRNA decay, interacts with the nuclear pore proteins Nup100p and Nup116p

21 January 2018

1 reference

https://api.crossref.org/works/10.3390%2FBIOM5042808

Control of HIV-1 env RNA splicing and transport: investigating the role of hnRNP A1 in exon splicing silencer (ESS3a) function

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/26492277

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

The human tap nuclear RNA export factor contains a novel transportin-dependent nuclear localization signal that lacks nuclear export signal function

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/26492277

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.3390/BIOM5042808

1 reference

14 August 2017

1 reference

14 August 2017

1 reference