Relationship between chemical shift value and accessible surface area for all amino acid atoms. (Q30375934)

14 November 2017

Relationship between chemical shift value and accessible surface area for all amino acid atoms. (English)

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14 November 2017

0 references

1

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14 November 2017

Wolfgang Rieping

2

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14 November 2017

2 April 2009

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14 November 2017

BMC Structural Biology

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14 November 2017

9

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14 November 2017

20

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https://scigraph.springernature.com/pub.10.1186/1472-6807-9-20

14 November 2017

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Consistent blind protein structure generation from NMR chemical shift data

20 June 2018

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BioMagResBank (BMRB) as a partner in the Worldwide Protein Data Bank (wwPDB): new policies affecting biomolecular NMR depositions

20 June 2018

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Remediation of the protein data bank archive

20 June 2018

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20 June 2018

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Factors affecting the use of 13C(alpha) chemical shifts to determine, refine, and validate protein structures

20 June 2018

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A global analysis of NMR distance constraints from the PDB.

20 June 2018

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Protein structure determination from NMR chemical shifts

20 June 2018

1 reference

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NMR: prediction of protein flexibility

20 June 2018

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The worldwide Protein Data Bank (wwPDB): ensuring a single, uniform archive of PDB data

20 June 2018

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Atom-wise statistics and prediction of solvent accessibility in proteins

20 June 2018

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PREDITOR: a web server for predicting protein torsion angle restraints

20 June 2018

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RECOORD: a recalculated coordinate database of 500+ proteins from the PDB using restraints from the BioMagResBank

20 June 2018

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The CCPN data model for NMR spectroscopy: development of a software pipeline

20 June 2018

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An evaluation of chemical shift index-based secondary structure determination in proteins: influence of random coil chemical shifts

20 June 2018

1 reference

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Protein chemical shifts arising from alpha-helices and beta-sheets depend on solvent exposure

20 June 2018

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STRIDE: a web server for secondary structure assignment from known atomic coordinates of proteins

20 June 2018

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Rapid and accurate calculation of protein 1H, 13C and 15N chemical shifts

20 June 2018

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Protein backbone angle restraints from searching a database for chemical shift and sequence homology

20 June 2018

1 reference

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Automated 1H and 13C chemical shift prediction using the BioMagResBank

20 June 2018

1 reference

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Hydrophobic regions on protein surfaces: definition based on hydration shell structure and a quick method for their computation.

20 June 2018

1 reference

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1H, 13C and 15N chemical shift referencing in biomolecular NMR

20 June 2018

1 reference

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Analysis of proton chemical shifts in regular secondary structure of proteins

20 June 2018

1 reference

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The 13C chemical-shift index: a simple method for the identification of protein secondary structure using 13C chemical-shift data

20 June 2018

1 reference

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'Random coil' 1H chemical shifts obtained as a function of temperature and trifluoroethanol concentration for the peptide series GGXGG.

20 June 2018

1 reference

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Protein conformation and proton nuclear-magnetic-resonance chemical shifts

20 June 2018

1 reference

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Relationship between nuclear magnetic resonance chemical shift and protein secondary structure

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2678133

The chemical shift index: a fast and simple method for the assignment of protein secondary structure through NMR spectroscopy

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2678133

Application of the random coil index to studying protein flexibility

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2678133

Accurate prediction of protein torsion angles using chemical shifts and sequence homology

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2678133

Probing multiple effects on 15N, 13C alpha, 13C beta, and 13C' chemical shifts in peptides using density functional theory

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2678133

The CCPN project: an interim report on a data model for the NMR community

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2678133

Carbon-13 NMR shielding in the twenty common amino acids: comparisons with experimental results in proteins

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2678133

Calibration of ring-current effects in proteins and nucleic acids

26 November 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/19341463

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

CAMRA: chemical shift based computer aided protein NMR assignments

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/19341463

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Protein chemical shift analysis: a practical guide

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/19341463

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1186/1472-6807-9-20

1 reference

PMCID

2678133

Dimensions Publication ID

14 November 2017

0 references

1 reference

14 November 2017

1 reference

PMCID

2678133