Lens β-crystallins: the role of deamidation and related modifications in aging and cataract. (Q30360031)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24613629%20AND%20SRC:MED&resulttype=core&format=json

10 March 2020

review article

1 reference

title

Lens β-crystallins: the role of deamidation and related modifications in aging and cataract (English)

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10 March 2020

3

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10 March 2020

author name string

Kirsten J Lampi

series ordinal

1

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10 March 2020

Phillip A Wilmarth

series ordinal

2

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10 March 2020

Larry L David

series ordinal

4

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10 March 2020

publication date

6 March 2014

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Progress in Biophysics and Molecular Biology

10 March 2020

published in

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10 March 2020

volume

115

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10 March 2020

issue

1

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10 March 2020

page(s)

21-31

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The one hour yeast proteome

10 March 2020

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The Human W42R D-Crystallin Mutant Structure Provides a Link between Congenital and Age-related Cataracts

3 June 2018

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A rapid, comprehensive liquid chromatography-mass spectrometry (LC-MS)-based survey of the Asp isomers in crystallins from human cataract lenses

3 June 2018

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Changes in solvent accessibility of wild-type and deamidated βB2-crystallin following complex formation with αA-crystallin

3 June 2018

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Cataract-causing defect of a mutant γ-crystallin proceeds through an aggregation pathway which bypasses recognition by the α-crystallin chaperone

3 June 2018

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Age-dependent deamidation of glutamine residues in human γS crystallin: deamidation and unstructured regions

3 June 2018

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Racemization of two proteins over our lifespan: deamidation of asparagine 76 in γS crystallin is greater in cataract than in normal lenses across the age range

3 June 2018

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Structural and biochemical characterization of the childhood cataract-associated R76S mutant of human γD-crystallin

3 June 2018

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Explosive expansion of betagamma-crystallin genes in the ancestral vertebrate

3 June 2018

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Racemisation and human cataract. D-Ser, D-Asp/Asn and D-Thr are higher in the lifelong proteins of cataract lenses than in age-matched normal lenses

3 June 2018

1 reference

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Solvent accessibility of betaB2-crystallin and local structural changes due to deamidation at the dimer interface.

3 June 2018

1 reference

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Partially folded aggregation intermediates of human gammaD-, gammaC-, and gammaS-crystallin are recognized and bound by human alphaB-crystallin chaperone

3 June 2018

1 reference

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Mass spectrometric analysis of asparagine deamidation and aspartate isomerization in polypeptides

3 June 2018

1 reference

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Aggregation of deamidated human betaB2-crystallin and incomplete rescue by alpha-crystallin chaperone

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4374893

Techniques for accurate protein identification in shotgun proteomic studies of human, mouse, bovine, and chicken lenses

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4374893

Age-dependent deamidation of lifelong proteins in the human lens

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4374893

Posttranslational modifications of the bovine lens beaded filament proteins filensin and CP49.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4374893

Lens aging: effects of crystallins

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4374893

Deamidation alters interactions of beta-crystallins in hetero-oligomers

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4374893

Quantification of isotopically overlapping deamidated and 18o-labeled peptides using isotopic envelope mixture modeling

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4374893

Expressed sequence tag analysis of guinea pig (Cavia porcellus) eye tissues for NEIBank.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4374893

Deamidation destabilizes and triggers aggregation of a lens protein, betaA3-crystallin.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4374893

Protein-protein interactions among human lens acidic and basic beta-crystallins

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4374893

Deamidation alters the structure and decreases the stability of human lens betaA3-crystallin

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4374893

Specificity of alphaA-crystallin binding to destabilized mutants of betaB1-crystallin

3 June 2018

1 reference

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3 June 2018

1 reference

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Deamidation in human lens betaB2-crystallin destabilizes the dimer

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4374893

Quantitative measurement of deamidation in lens betaB2-crystallin and peptides by direct electrospray injection and fragmentation in a Fourier transform mass spectrometer

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4374893

Unfolding crystallins: the destabilizing role of a beta-hairpin cysteine in betaB2-crystallin by simulation and experiment

3 June 2018

1 reference

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Crystallins in water soluble-high molecular weight protein fractions and water insoluble protein fractions in aging and cataractous human lenses

3 June 2018

1 reference

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Ageing and vision: structure, stability and function of lens crystallins

3 June 2018

1 reference

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Post-translational modifications of aquaporin 0 (AQP0) in the normal human lens: spatial and temporal occurrence

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4374893

Laser light-scattering evidence for an altered association of beta B1-crystallin deamidated in the connecting peptide

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4374893

Crystal structure of truncated human βB1‐crystallin

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4374893

High-resolution X-ray crystal structures of human gammaD crystallin (1.25 A) and the R58H mutant (1.15 A) associated with aculeiform cataract

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4374893

Existence of deamidated alphaB-crystallin fragments in normal and cataractous human lenses.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4374893

Deamidation in human gamma S-crystallin from cataractous lenses is influenced by surface exposure

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4374893

Shotgun identification of protein modifications from protein complexes and lens tissue

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4374893

Lens proteomics: analysis of rat crystallin sequences and two-dimensional electrophoresis map

3 June 2018

1 reference

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The major in vivo modifications of the human water-insoluble lens crystallins are disulfide bonds, deamidation, methionine oxidation and backbone cleavage

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4374893

Increased deamidation of asparagine-101 from alpha-A crystallin in the high molecular weight aggregate of the normal human lens

3 June 2018

1 reference

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Probing the structure and interactions of crystallin proteins by NMR spectroscopy.

3 June 2018

1 reference

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3 June 2018

1 reference

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Quantitation of asparagine-101 deamidation from alpha-A crystallin during aging of the human lens

3 June 2018

1 reference

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Mutational analysis of hydrophobic domain interactions in gamma B-crystallin from bovine eye lens

3 June 2018

1 reference

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Sequence analysis of betaA3, betaB3, and betaA4 crystallins completes the identification of the major proteins in young human lens

3 June 2018

1 reference

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The elusive role of the N-terminal extension of beta A3- and beta A1-crystallin

3 June 2018

1 reference

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The sequence of human betaB1-crystallin cDNA allows mass spectrometric detection of betaB1 protein missing portions of its N-terminal extension

3 June 2018

1 reference

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Beta A3/A1-crystallin association: role of the N-terminal arm.

3 June 2018

1 reference

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Post-translational modifications of water-soluble human lens crystallins from young adults

3 June 2018

1 reference

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Close packing of an oligomeric eye lens beta-crystallin induces loss of symmetry and ordering of sequence extensions

3 June 2018

1 reference

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Dimerization of beta B2-crystallin: the role of the linker peptide and the N- and C-terminal extensions

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4374893

Age dependence of freezable and nonfreezable water content of normal human lenses.

3 June 2018

1 reference

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Deamidation, isomerization, and racemization at asparaginyl and aspartyl residues in peptides. Succinimide-linked reactions that contribute to protein degradation

3 June 2018

1 reference

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Site-specific racemization in aging alpha A-crystallin

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4374893

The sequences of two peptides from cataract lenses suggest they arise by deamidation

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4374893

X-ray analysis of beta B2-crystallin and evolution of oligomeric lens proteins

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4374893

Sequence and structure determinants of the nonenzymatic deamidation of asparagine and glutamine residues in proteins

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4374893

Alpha-crystallin can function as a molecular chaperone

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4374893

Tissue transglutaminase catalyzes the deamidation of glutamines in lens betaB(2)- and betaB(3)-crystallins

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4374893

Reliable detection of deamidated peptides from lens crystallin proteins using changes in reversed-phase elution times and parent ion masses.

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4374893

Measurement of deamidation of intact proteins by isotopic envelope and mass defect with ion cyclotron resonance Fourier transform mass spectrometry

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4374893

Quantitative measurement of young human eye lens crystallins by direct injection Fourier transform ion cyclotron resonance mass spectrometry

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4374893

In vivo heteromer formation. Expression of soluble betaA4-crystallin requires coexpression of a heteromeric partner.

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4374893

The absolute quantification strategy: a general procedure for the quantification of proteins and post-translational modifications

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4374893

Prediction of primary structure deamidation rates of asparaginyl and glutaminyl peptides through steric and catalytic effects

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4374893

The stability of human acidic beta-crystallin oligomers and hetero-oligomers

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4374893

Human beta-crystallins modified by backbone cleavage, deamidation and oxidation are prone to associate

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4374893

Mass spectrometric quantification of acetylation at specific lysines within the amino-terminal tail of histone H4

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4374893

Deamidation, but not truncation, decreases the urea stability of a lens structural protein, betaB1-crystallin

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4374893

Mechanism of asparagine deamidation during human senile cataractogenesis

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4374893

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4374893

Size of human lens beta-crystallin aggregates are distinguished by N-terminal truncation of betaB1.

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4374893

The role of the sequence extensions in beta-crystallin assembly.

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4374893

Monomer-dimer equilibrium of normal and modified beta A3-crystallins: experimental determination and molecular modeling

26 November 2018

1 reference

12 December 2020

The short 5' untranslated region of the betaA3/A1-crystallin mRNA is responsible for leaky ribosomal scanning

1 reference

12 December 2020

Stepwise degradations and deamidation of the eye lens protein α-crystallin in ageing

1 reference

12 December 2020

Decreased heat stability and increased chaperone requirement of modified human betaB1-crystallins

1 reference

12 December 2020

Structure, biological activity and membrane partitioning of analogs of the isoprenylated a‐factor mating peptide of Saccharomyces cerevisiae

1 reference

12 December 2020

Post-translational modifications of eye lens crystallins: crosslinking, phosphorylation and deamidation

1 reference

12 December 2020

Primary gene products of bovine beta-crystallin and reassociation behavior of its aggregates

1 reference

12 December 2020

Subunit exchange of polydisperse proteins: mass spectrometry reveals consequences of alphaA-crystallin truncation

1 reference

12 December 2020

Increased deamidation of asparagine during human senile cataractogenesis

1 reference

12 December 2020

Spontaneous peptide bond cleavage in aging alpha-crystallin through a succinimide intermediate

1 reference

12 December 2020

Quantitation of specific cleavage sites at the C-terminal region of alpha-A crystallin from human lenses of different age

1 reference

12 December 2020

The stiffness of human cataract lenses is a function of both age and the type of cataract

1 reference

12 December 2020

Modifications of the water-insoluble human lens alpha-crystallins

1 reference

12 December 2020

Protein distribution and characterization in the prenatal and postnatal human lens

1 reference

12 December 2020

Association of partially folded lens betaB2-crystallins with the alpha-crystallin molecular chaperone

1 reference

12 December 2020

Folding and self-assembly of the domains of betaB2-crystallin from rat eye lens

1 reference

12 December 2020

Deamidation of alpha-A crystallin from nuclei of cataractous and normal human lenses

1 reference

12 December 2020

Structural studies on beta H-crystallin from bovine eye lens

1 reference

12 December 2020

Quaternary interactions in eye lens beta-crystallins: basic and acidic subunits of beta-crystallins favor heterologous association

1 reference

12 December 2020

Age-dependent deamidation of chicken alpha A-crystallin

1 reference

12 December 2020

Simultaneous stereoinversion and isomerization at the Asp-4 residue in βB2-crystallin from the aged human eye lenses

1 reference

12 December 2020

Binding of destabilized betaB2-crystallin mutants to alpha-crystallin: the role of a folding intermediate

1 reference

12 December 2020

Short-range order of crystallin proteins accounts for eye lens transparency

1 reference

12 December 2020

Lens proteomics: the accumulation of crystallin modifications in the mouse lens with age

1 reference

12 December 2020

Post-translational modifications in the nuclear region of young, aged, and cataract human lenses

1 reference

12 December 2020

Cleavage of beta crystallins during maturation of bovine lens

1 reference

12 December 2020

Glutamine deamidation destabilizes human gammaD-crystallin and lowers the kinetic barrier to unfolding

1 reference

12 December 2020

10.1016/J.PBIOMOLBIO.2014.02.004

Identifiers

DOI

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24613629%20AND%20SRC:MED&resulttype=core&format=json

10 March 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24613629%20AND%20SRC:MED&resulttype=core&format=json

10 March 2020

PubMed publication ID

24613629

1 reference