Systems level analysis of the Chlamydomonas reinhardtii metabolic network reveals variability in evolutionary co-conservation (Q30276470)

14 June 2017

Systems level analysis of the Chlamydomonas reinhardtii metabolic network reveals variability in evolutionary co-conservation (English)

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Chlamydomonas reinhardtii

14 June 2017

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13

Jason Papin

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14 June 2017

Ashish Jaiswal

6

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Basel Khraiwesh

Basel Khraiwesh

5

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Kourosh Salehi-Ashtiani

Kourosh Salehi-Ashtiani

16

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Roger Chang

Roger L Chang

12

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David R. Nelson

David R Nelson

9

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author name string

Amphun Chaiboonchoe

1

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14 June 2017

Lila Ghamsari

2

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14 June 2017

Bushra Dohai

3

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14 June 2017

Patrick Ng

4

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14 June 2017

Kenan Jijakli

7

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14 June 2017

Joseph Koussa

8

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14 June 2017

Hong Cai

10

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14 June 2017

Xinping Yang

11

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14 June 2017

Haiyuan Yu

14

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14 June 2017

Santhanam Balaji

15

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14 June 2017

language of work or name

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30 June 2016

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14 June 2017

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12

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8

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2394-2407

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Evolutionary plasticity and innovations in complex metabolic reaction networks

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Evolution of metabolic network organization

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Chance and necessity in the evolution of minimal metabolic networks

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Three-dimensional structural view of the central metabolic network of Thermotoga maritima

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Prevalent positive epistasis in Escherichia coli and Saccharomyces cerevisiae metabolic networks

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Metabolic network reconstruction of Chlamydomonas offers insight into light-driven algal metabolism.

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BiNGO: a Cytoscape plugin to assess overrepresentation of gene ontology categories in biological networks

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Whole-Genome Resequencing Reveals Extensive Natural Variation in the Model Green Alga Chlamydomonas reinhardtii.

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Genome-wide functional annotation and structural verification of metabolic ORFeome of Chlamydomonas reinhardtii

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Mapping and quantifying mammalian transcriptomes by RNA-Seq

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Differential expression in RNA-seq: a matter of depth

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Design principles of molecular networks revealed by global comparisons and composite motifs

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Assigning protein functions by comparative genome analysis: Protein phylogenetic profiles

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Interplay between network structures, regulatory modes and sensing mechanisms of transcription factors in the transcriptional regulatory network of E. coli

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Identification of global ferredoxin interaction networks in Chlamydomonas reinhardtii

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Protein interaction mapping in C. elegans using proteins involved in vulval development

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Annotation transfer between genomes: protein-protein interologs and protein-DNA regulogs

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A soluble guanylate cyclase mediates negative signaling by ammonium on expression of nitrate reductase in Chlamydomonas.

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Flux coupling analysis of genome-scale metabolic network reconstructions.

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Hierarchical thinking in network biology: the unbiased modularization of biochemical networks.

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Hierarchical modularity and the evolution of genetic interactomes across species.

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Conservation and rewiring of functional modules revealed by an epistasis map in fission yeast.

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Evolutionary dynamics of prokaryotic transcriptional regulatory networks

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Transcriptomic and phylogenetic analysis of a bacterial cell cycle reveals strong associations between gene co-expression and evolution

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Microalgal Metabolic Network Model Refinement through High-Throughput Functional Metabolic Profiling

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21 January 2018

Identifiers

DOI

10.1039/C6MB00237D

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14 June 2017

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