Structure of the archaeal head-tailed virus HSTV-1 completes the HK97 fold story. (Q28680796)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23733949%20AND%20SRC:MED&resulttype=core&format=json

2 March 2020

title

Structure of the archaeal head-tailed virus HSTV-1 completes the HK97 fold story (English)

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2 March 2020

4

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2 March 2020

Sarah J. Butcher

8

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2 March 2020

5

Deborah Jacobs-Sera

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2 March 2020

author name string

Maija K Pietilä

1

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2 March 2020

Pasi Laurinmäki

2

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2 March 2020

Daniel A Russell

3

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2 March 2020

Roger W Hendrix

6

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2 March 2020

Dennis H Bamford

7

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2 March 2020

language of work or name

English

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publication date

3 June 2013

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Proceedings of the National Academy of Sciences of the United States of America

2 March 2020

published in

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2 March 2020

volume

110

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issue

26

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2 March 2020

page(s)

10604-10609

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Bacteriophage HK97 capsid assembly and maturation

2 March 2020

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3696780

Genomics of Bacterial and Archaeal Viruses: Dynamics within the Prokaryotic Virosphere

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3696780

The Prohead-I Structure of Bacteriophage HK97: Implications for Scaffold-Mediated Control of Particle Assembly and Maturation

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3696780

Order to the viral universe

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3696780

I-TASSER: a unified platform for automated protein structure and function prediction

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3696780

Structure and host-cell interaction of SH1, a membrane-containing, halophilic euryarchaeal virus

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3696780

Backbone structure of the infectious epsilon15 virus capsid revealed by electron cryomicroscopy

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3696780

The crystal structure of a virus-like particle from the hyperthermophilic archaeon Pyrococcus furiosus provides insight into the evolution of viruses

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3696780

Ab initio random model method facilitates 3D reconstruction of icosahedral particles

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3696780

Structure of epsilon15 bacteriophage reveals genome organization and DNA packaging/injection apparatus

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3696780

Common ancestry of herpesviruses and tailed DNA bacteriophages

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3696780

Fourier shell correlation threshold criteria

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3696780

UCSF Chimera--a visualization system for exploratory research and analysis

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3696780

ARAGORN, a program to detect tRNA genes and tmRNA genes in nucleotide sequences

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3696780

The refined structure of a protein catenane: the HK97 bacteriophage capsid at 3.44 A resolution

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3696780

Improved microbial gene identification with GLIMMER

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3696780

Viral evolution revealed by bacteriophage PRD1 and human adenovirus coat protein structures

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3696780

Consed: a graphical tool for sequence finishing

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3696780

tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3696780

Box-shaped halophilic bacteria

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3696780

Tricine-sodium dodecyl sulfate-polyacrylamide gel electrophoresis for the separation of proteins in the range from 1 to 100 kDa

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3696780

A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding

17 March 2017

3 references

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3696780

17 March 2017

https://api.crossref.org/works/10.1073/PNAS.1303047110

22 April 2017

https://api.crossref.org/works/10.1073%2FPNAS.1303047110

Optimal determination of particle orientation, absolute hand, and contrast loss in single-particle electron cryomicroscopy

22 April 2017

2 references

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3696780

7 April 2017

https://api.crossref.org/works/10.1073%2FPNAS.1303047110

Rates of evolutionary change in viruses: patterns and determinants

22 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3696780

Marine viruses--major players in the global ecosystem

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3696780

Topologically linked protein rings in the bacteriophage HK97 capsid

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3696780

Insights into head-tailed viruses infecting extremely halophilic archaea

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3696780

Structure unifies the viral universe

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3696780

Postcards from the edge: structural genomics of archaeal viruses

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3696780

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3696780

Interaction of alphaVbeta3 and alphaVbeta6 integrins with human parechovirus 1.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3696780

Comparative analysis of the mosaic genomes of tailed archaeal viruses and proviruses suggests common themes for virion architecture and assembly with tailed viruses of bacteria.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3696780

An ssDNA virus infecting archaea: a new lineage of viruses with a membrane envelope.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3696780

Bacteriophage lambda stabilization by auxiliary protein gpD: timing, location, and mechanism of attachment determined by cryo-EM.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3696780

Infectious disease in the genomic era.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3696780

High performance computing in structural determination by electron cryomicroscopy

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3696780

Template-based modeling and free modeling by I-TASSER in CASP7.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3696780

Quasi-atomic model of bacteriophage t7 procapsid shell: insights into the structure and evolution of a basic fold.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3696780

Capsid conformational sampling in HK97 maturation visualized by X-ray crystallography and cryo-EM.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3696780

Viruses of the Archaea: a unifying view

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3696780

AUTO3DEM--an automated and high throughput program for image reconstruction of icosahedral particles

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3696780

Bacteriophage T5 structure reveals similarities with HK97 and T4 suggesting evolutionary relationships

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3696780

Evolutionary genomics of archaeal viruses: unique viral genomes in the third domain of life

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3696780

Structure of an archaeal virus capsid protein reveals a common ancestry to eukaryotic and bacterial viruses

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3696780

Structural and functional similarities between the capsid proteins of bacteriophages T4 and HK97 point to a common ancestry

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3696780

Conservation of the capsid structure in tailed dsDNA bacteriophages: the pseudoatomic structure of phi29.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3696780

Does common architecture reveal a viral lineage spanning all three domains of life?

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3696780

The structure of a thermophilic archaeal virus shows a double-stranded DNA viral capsid type that spans all domains of life

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3696780

Do viruses form lineages across different domains of life?

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3696780

Handedness of the herpes simplex virus capsid and procapsid

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3696780

Tailed bacteriophages: the order caudovirales

3 June 2018

2 references

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3696780

3 June 2018

https://api.crossref.org/works/10.1073%2FPNAS.1303047110

Cryo-electron microscopy of viruses

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3696780

Coat protein fold and maturation transition of bacteriophage P22 seen at subnanometer resolutions

3 June 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1303047110

Global network of specific virus-host interactions in hypersaline environments.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1303047110

A thaumarchaeal provirus testifies for an ancient association of tailed viruses with archaea

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1303047110

Fossil record of an archaeal HK97-like provirus.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1303047110

Structural transitions during bacteriophage HK97 head assembly.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1303047110

Recognition of genes in DNA sequence with ambiguities.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1303047110

The PM2 virion has a novel organization with an internal membrane and pentameric receptor binding spikes.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1303047110

21 January 2018

Identifiers

DOI

10.1073/PNAS.1303047110

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23733949%20AND%20SRC:MED&resulttype=core&format=json

2 March 2020

0 references

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23733949%20AND%20SRC:MED&resulttype=core&format=json

2 March 2020

1 reference