Molecular phylogeny of Squaliformes and first occurrence of bioluminescence in sharks (Q28610951)

1

0 references

Chenhong Li

2

0 references

Julien M Claes

3

0 references

Shannon Corrigan

4

0 references

Gavin J P Naylor

https://scigraph.springernature.com/pub.10.1186/s12862-015-0446-6

5

0 references

language of work or name

English

0 references

publication date

16 August 2015

0 references

published in

BMC Evolutionary Biology

0 references

volume

15

0 references

issue

1

0 references

page(s)

162

0 references

exact match

0 references

cites work

Species-specific bioluminescence facilitates speciation in the deep sea

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4537554

RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4537554

Selecting informative subsets of sparse supermatrices increases the chance to find correct trees

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4537554

A new paleozoic Symmoriiformes (Chondrichthyes) from the late Carboniferous of Kansas (USA) and cladistic analysis of early chondrichthyans

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4537554

Shark tales: a molecular species-level phylogeny of sharks (Selachimorpha, Chondrichthyes)

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4537554

Molecular phylogeny and node time estimation of bioluminescent Lantern Sharks (Elasmobranchii: Etmopteridae)

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4537554

The lantern shark's light switch: turning shallow water crypsis into midwater camouflage

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4537554

Nine exceptional radiations plus high turnover explain species diversity in jawed vertebrates

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4537554

BEAST: Bayesian evolutionary analysis by sampling trees

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4537554

Relaxed phylogenetics and dating with confidence

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4537554

MAFFT version 5: improvement in accuracy of multiple sequence alignment

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4537554

MAFFT: a novel method for rapid multiple sequence alignment based on fast Fourier transform

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4537554

PartitionFinder: Combined Selection of Partitioning Schemes and Substitution Models for Phylogenetic Analyses

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4537554

PhyloBayes 3: a Bayesian software package for phylogenetic reconstruction and molecular dating

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4537554

ABySS: a parallel assembler for short read sequence data

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4537554

GEIGER: investigating evolutionary radiations

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4537554

A Bayesian mixture model for across-site heterogeneities in the amino-acid replacement process

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4537554

Suppression of long-branch attraction artefacts in the animal phylogeny using a site-heterogeneous model

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4537554

A DNA sequence-based identification checklist for Taiwanese chondrichthyans

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4537554

Selecting optimal partitioning schemes for phylogenomic datasets

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4537554

Iso-luminance counterillumination drove bioluminescent shark radiation

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4537554

A deepwater fish with 'lightsabers'--dorsal spine-associated luminescence in a counterilluminating lanternshark

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4537554

What is an 'elasmobranch'? The impact of palaeontology in understanding elasmobranch phylogeny and evolution

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4537554

HaMStR: profile hidden markov model based search for orthologs in ESTs

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4537554

Phyletic Relationships of Living Sharks and Rays

29 September 2017

1 reference

https://api.crossref.org/works/10.1186%2FS12862-015-0446-6

A palaeontological and phylogenetical analysis of squaliform sharks (Chondrichthyes: Squaliformes) based on dental characters

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS12862-015-0446-6

The effect of habitat on modern shark diversification

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS12862-015-0446-6

A DNA Sequence–Based Approach To the Identification of Shark and Ray Species and Its Implications for Global Elasmobranch Diversity and Parasitology

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS12862-015-0446-6

Cutadapt removes adapter sequences from high-throughput sequencing reads

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS12862-015-0446-6

How many bootstrap replicates are necessary?

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS12862-015-0446-6

Chondrichthyan-like scales from the Middle Ordovician of Australia

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS12862-015-0446-6

Oldest evidence of bramble sharks (Elasmobranchii, Echinorhinidae) in the Lower Cretaceous of southeast France and the evolutionary history of orbitostylic sharks

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS12862-015-0446-6

Capturing protein-coding genes across highly divergent species

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4537554

GABA inhibition of luminescence from lantern shark (Etmopterus spinax) photophores

27 November 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/26277575

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Control of luminescence from pygmy shark (Squaliolus aliae) photophores

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/26277575