CycloBranch: De Novo Sequencing of Nonribosomal Peptides from Accurate Product Ion Mass Spectra (Q28265386)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26195308%20AND%20SRC:MED&resulttype=core&format=json

19 February 2020

title

CycloBranch: De Novo Sequencing of Nonribosomal Peptides from Accurate Product Ion Mass Spectra (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26195308%20AND%20SRC:MED&resulttype=core&format=json

19 February 2020

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26195308%20AND%20SRC:MED&resulttype=core&format=json

19 February 2020

Karel Lemr

series ordinal

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26195308%20AND%20SRC:MED&resulttype=core&format=json

19 February 2020

Vladimír Havlíček

series ordinal

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26195308%20AND%20SRC:MED&resulttype=core&format=json

19 February 2020

author name string

Kevin A Schug

series ordinal

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26195308%20AND%20SRC:MED&resulttype=core&format=json

19 February 2020

language of work or name

English

0 references

publication date

21 July 2015

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26195308%20AND%20SRC:MED&resulttype=core&format=json

Journal of the American Society for Mass Spectrometry

19 February 2020

published in

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26195308%20AND%20SRC:MED&resulttype=core&format=json

19 February 2020

volume

26

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26195308%20AND%20SRC:MED&resulttype=core&format=json

19 February 2020

issue

10

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26195308%20AND%20SRC:MED&resulttype=core&format=json

19 February 2020

page(s)

1780-1786

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26195308%20AND%20SRC:MED&resulttype=core&format=json

https://scigraph.springernature.com/pub.10.1007/s13361-015-1211-1

19 February 2020

exact match

0 references

cites work

Nonribosomal peptide synthetases: structures and dynamics

1 reference

https://api.crossref.org/works/10.1007%2FS13361-015-1211-1

Diversity of monomers in nonribosomal peptides: towards the prediction of origin and biological activity.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS13361-015-1211-1

Endless peptides--circular forms in nature

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS13361-015-1211-1

Cycloquest: identification of cyclopeptides via database search of their mass spectra against genome databases

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS13361-015-1211-1

De novo peptide sequencing via tandem mass spectrometry

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS13361-015-1211-1

Error-tolerant identification of peptides in sequence databases by peptide sequence tags

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS13361-015-1211-1

Aggressive dereplication using UHPLC-DAD-QTOF: screening extracts for up to 3000 fungal secondary metabolites

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS13361-015-1211-1

NORINE: a database of nonribosomal peptides

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS13361-015-1211-1

Dereplication and de novo sequencing of nonribosomal peptides

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS13361-015-1211-1

Dereplicating nonribosomal peptides using an informatic search algorithm for natural products (iSNAP) discovery.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS13361-015-1211-1

NRPquest: Coupling Mass Spectrometry and Genome Mining for Nonribosomal Peptide Discovery

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS13361-015-1211-1

Algorithms for the de novo sequencing of peptides from tandem mass spectra

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS13361-015-1211-1

PEAKS: powerful software for peptide de novo sequencing by tandem mass spectrometry

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS13361-015-1211-1

Sequence database searches via de novo peptide sequencing by tandem mass spectrometry

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS13361-015-1211-1

PepNovo: de novo peptide sequencing via probabilistic network modeling

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS13361-015-1211-1

DeNovoGUI: an open source graphical user interface for de novo sequencing of tandem mass spectra.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS13361-015-1211-1

Sequencing cyclic peptides by multistage mass spectrometry

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS13361-015-1211-1

Multiplex de novo sequencing of peptide antibiotics

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS13361-015-1211-1

Interpretation of tandem mass spectra obtained from cyclic nonribosomal peptides

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS13361-015-1211-1

Peptide Fragment Ion Analyser (PFIA): a simple and versatile tool for the interpretation of tandem mass spectrometric data and de novo sequencing of peptides

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS13361-015-1211-1

CYCLONE--a utility for de novo sequencing of microbial cyclic peptides.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS13361-015-1211-1

OpenMS - an open-source software framework for mass spectrometry

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS13361-015-1211-1

The ABC's (and XYZ's) of peptide sequencing

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS13361-015-1211-1

A nomenclature system for labeling cyclic peptide fragments.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS13361-015-1211-1

Sequence-scrambling fragmentation pathways of protonated peptides

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS13361-015-1211-1

On comparison of SimTandem with state-of-the-art peptide identification tools, efficiency of precursor mass filter and dealing with variable modifications

21 January 2018

1 reference

https://pubmed.ncbi.nlm.nih.gov/26195308

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

mMass as a software tool for the annotation of cyclic peptide tandem mass spectra

1 reference

https://pubmed.ncbi.nlm.nih.gov/26195308

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

On Comparison of SimTandem with State-of-the-Art Peptide Identification Tools, Efficiency of Precursor Mass Filter and Dealing with Variable Modifications.

1 reference

https://pubmed.ncbi.nlm.nih.gov/26195308