Histone deacetylases RPD3 and HOS2 regulate the transcriptional activation of DNA damage-inducible genes (Q27932545)

GOA release 2020-03-11

author name string

Vishva Mitra Sharma

1

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Raghuvir S Tomar

2

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Alison E Dempsey

3

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Joseph C Reese

Molecular and Cellular Biology

4

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language of work or name

English

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publication date

April 2007

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published in

1 reference

1 December 2016

27

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page(s)

3199-210

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issue

8

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describes a project that uses

ImageQuant

1 reference

Europe PubMed Central

11 June 2022

https://www.ebi.ac.uk/europepmc/webservices/rest/PMC1899941/fullTextXML

based on heuristic

inferred from PubMed Central ID database lookup

cites work

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Ssn6-Tup1 interacts with class I histone deacetylases required for repression

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Acetylation of histones and transcription-related factors

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NORF5/HUG1 is a component of the MEC1-mediated checkpoint response to DNA damage and replication arrest in Saccharomyces cerevisiae

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The DNA replication and damage checkpoint pathways induce transcription by inhibition of the Crt1 repressor

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Targeted recruitment of the Sin3-Rpd3 histone deacetylase complex generates a highly localized domain of repressed chromatin in vivo

20 March 2017

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Transcriptional repression by UME6 involves deacetylation of lysine 5 of histone H4 by RPD3.

20 March 2017

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Repression by Ume6 involves recruitment of a complex containing Sin3 corepressor and Rpd3 histone deacetylase to target promoters

20 March 2017

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Histone acetyltransferases

20 March 2017

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Histone acetylation and transcriptional regulatory mechanisms

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Estrogen receptor-alpha directs ordered, cyclical, and combinatorial recruitment of cofactors on a natural target promoter

7 April 2017

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7 April 2017

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29 September 2017

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Genome-wide analysis of the relationship between transcriptional regulation by Rpd3p and the histone H3 and H4 amino termini in budding yeast

29 September 2017

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29 September 2017

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The FACT complex travels with elongating RNA polymerase II and is important for the fidelity of transcriptional initiation in vivo

29 September 2017

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Histone acetylation and deacetylation in yeast

29 September 2017

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Defects in SPT16 or POB3 (yFACT) in Saccharomyces cerevisiae cause dependence on the Hir/Hpc pathway: polymerase passage may degrade chromatin structure.

29 September 2017

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Targeted recruitment of Rpd3 histone deacetylase represses transcription by inhibiting recruitment of Swi/Snf, SAGA, and TATA binding protein

29 September 2017

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Histone-dependent association of Tup1-Ssn6 with repressed genes in vivo

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1899941

Derepression of DNA damage-regulated genes requires yeast TAF(II)s

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1899941

Chromatin disassembly mediated by the histone chaperone Asf1 is essential for transcriptional activation of the yeast PHO5 and PHO8 genes.

29 September 2017

1 reference

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Global histone acetylation and deacetylation in yeast

2 June 2018

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Acetylation of general transcription factors by histone acetyltransferases

2 June 2018

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Yeast histone H4 N-terminal sequence is required for promoter activation in vivo

2 June 2018

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The Saccharomyces cerevisiae GAM2/SIN3 protein plays a role in both activation and repression of transcription

2 June 2018

1 reference

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Isolation of yeast nuclei and micrococcal nuclease mapping of nucleosome positioning.

2 June 2018

1 reference

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Mapping global histone acetylation patterns to gene expression

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1899941

Functional analysis of TFIID components using conditional mutants.

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1899941

Histones are first hyperacetylated and then lose contact with the activated PHO5 promoter.

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1899941

Nucleosomes unfold completely at a transcriptionally active promoter.

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1899941

Requirement of Hos2 histone deacetylase for gene activity in yeast

27 November 2018

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Genome-wide binding map of the histone deacetylase Rpd3 in yeast

27 November 2018

1 reference

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Highly specific antibodies determine histone acetylation site usage in yeast heterochromatin and euchromatin

27 November 2018

1 reference

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Ssn6-Tup1 regulates RNR3 by positioning nucleosomes and affecting the chromatin structure at the upstream repression sequence.

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1899941