First Crystal Structure of a Fungal High-redox Potential Dye-decolorizing Peroxidase: SUBSTRATE INTERACTION SITES AND LONG-RANGE ELECTRON TRANSFER (Q27675457)

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Language	Label	Description	Also known as
English	First Crystal Structure of a Fungal High-redox Potential Dye-decolorizing Peroxidase: SUBSTRATE INTERACTION SITES AND LONG-RANGE ELECTRON TRANSFER	scientific article

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scholarly article

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First Crystal Structure of a Fungal High-redox Potential Dye-decolorizing Peroxidase: SUBSTRATE INTERACTION SITES AND LONG-RANGE ELECTRON TRANSFER (English)

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crystal structure

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Martin Hofrichter

5

object named as

Martin Hofrichter

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author name string

Eric Strittmatter

1

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Christiane Liers

2

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René Ullrich

3

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Sabrina Wachter

4

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Dietmar A Plattner

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Klaus Piontek

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language of work or name

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publication date

8 February 2013

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Journal of Biological Chemistry

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288

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6

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4095-102

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Distal Heme Pocket Residues of B-type Dye-decolorizing Peroxidase: ARGININE BUT NOT ASPARTATE IS ESSENTIAL FOR PEROXIDASE ACTIVITY

1 reference

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1 reference

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1 reference

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12 December 2020

based on heuristic

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1 reference

https://pubmed.ncbi.nlm.nih.gov/23235158

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inferred from PubMed ID database lookup

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1 reference

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inferred from PubMed ID database lookup

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1 reference

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Identifiers

10.1074/JBC.M112.400176

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Consolidated OpenCitations Corpus – April 2017

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OpenCitations bibliographic resource ID

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Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

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Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

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Consolidated OpenCitations Corpus – April 2017

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ResearchGate publication ID

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